Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3995 |
Symbol | |
ID | 5077525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009426 |
Strand | - |
Start bp | 163015 |
End bp | 164469 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640481100 |
Product | TraH family protein |
Protein accession | YP_001165762 |
Protein GI | 146275601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCCC GTCGCTTCGC CCGCCGCCTC CATGGAGCCT CGCGCCGCGC ACTTGGCACA GTCCTCGGTG CCGCGGTTCT GCTCGCTTCG CCCACACCCG CCTCGGCCGG GGTCGAAGGC GAGATGCAGA GCTTCATGTC CGACATGGGC GTCCAGGCCA ATGTCACCGG TCCCAGCGCC TACCAGGGCC AGTCGGCGGG CTATTATTCG ATGGGCTCGG TCTGGTCGCG CTTCCCGCAA AAGAACATCC AGCCCTTCAA CCTCCAGTTG CCCCACGCGC GCGCCGGGTG CGGCGGCATC GACCTCTTTG CCGGGTCGTT CTCGTTCATC AACACCGCCG AACTTGTCGC CATGCTGAAA GCGACCGCGA ACAACGCGCT CGGCTTTGCC TTCAAACTCG CGATCGACAC GATCTCGCCC GAGATCGGCA AGGTCATGGA TGAGCTGGCG CAGAAGGTTC AGCAGATGAA CCAGATGAAC ATCTCGTCCT GCGAGACCGC GCAGGCGCTG GTCGGCGGCC TCTGGCCGAA GAGCGATACG GCGAGTTCGG TCATCTGCGA GGCGATCGCC AACAGTCAGG GCGCGGTCTC CGACTGGGCC CGCGCGCGCC AGCAGTGCAA CAACGGCGGC CAGCGCGAAG CCTTGAAAAG CGCCAATTCC GACCCGGACA TGAAGGAACA GGCCGGGATG CCCAACAATT ACACCTGGGC GGCATTGGGC AAGAAATACG GTGGGTTCGA CACCCAGTTC CGCGAGTTCC TGATGACCCT CGTCGGGACC GTGATCTACG ATCCGGCCGG TAATGGCGGC AAGCCGAGGG TCCAGTTCAT CGGCCCGGCC GACCCGGCGC TGATCAGCGC CATGCTCGAC GGCACCTCTT CCACCCCGCA CAAATACTGG AGCTGCGGCG GCGATAGCGC CAAGTGCATG GCGCCGAGCG AGATCGACAT GGTGATCGGG CCTAATGCAG CGATCAAGGC GCGGGTGCGC ACGCTGATCG AGAGCATGGC CTTGAAAGTG CGCGATCCCG GCGCCTCGTT GACCCCGGCC GAGATCCAGC TCCTCGGCAT GGCGAGCGTG CCGGTCTACA AGATCATCAC CGTGAGCGCA GCGGCCGAGT TCGGCATCTC CGCGCAGGAG ATCAACGACC TTTCCGAAAT AGTCGCGGTC GATCTCGTCA CCACCATGAC CATGCGGTTC ATCGACATGG CAGTGAACGC GCGTTCGGAC TTCAACGGGG CTGATGCGGA TAGCTTACGC GAATGGCGCG AGGGGCTTTA CGAGACCCGG CGCAATTTCC TCGGGATCGC GGCGCGCACC TCGCAGCGCT TCGACCAGAC CTTTGCGCTG ATCCAGCGCA CGCAGATGCT CGAAAAGACC CTGCGTACCC AGCTCTCGCC CCAGATGTCG GCCGCGCTGC GCTTTTCGCG CACGCTCGGC AGCCAGGTCC AGTAA
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Protein sequence | MRARRFARRL HGASRRALGT VLGAAVLLAS PTPASAGVEG EMQSFMSDMG VQANVTGPSA YQGQSAGYYS MGSVWSRFPQ KNIQPFNLQL PHARAGCGGI DLFAGSFSFI NTAELVAMLK ATANNALGFA FKLAIDTISP EIGKVMDELA QKVQQMNQMN ISSCETAQAL VGGLWPKSDT ASSVICEAIA NSQGAVSDWA RARQQCNNGG QREALKSANS DPDMKEQAGM PNNYTWAALG KKYGGFDTQF REFLMTLVGT VIYDPAGNGG KPRVQFIGPA DPALISAMLD GTSSTPHKYW SCGGDSAKCM APSEIDMVIG PNAAIKARVR TLIESMALKV RDPGASLTPA EIQLLGMASV PVYKIITVSA AAEFGISAQE INDLSEIVAV DLVTTMTMRF IDMAVNARSD FNGADADSLR EWREGLYETR RNFLGIAART SQRFDQTFAL IQRTQMLEKT LRTQLSPQMS AALRFSRTLG SQVQ
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