| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3930 |
|---|
| Symbol | |
|---|
| ID | 5077414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009426 |
|---|
| Strand | + |
|---|
| Start bp | 104171 |
|---|
| End bp | 105958 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640481036 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001165698 |
|---|
| Protein GI | 146275537 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG CTCCACGCAA AGGGCGCAAG GTCAGTTTCG AGGCCGCCGC GACTGCGCCC
GAGGCCGATC CATGGTCGCA GATCAGCACG CTGCGCTTCT TGATCGATCC GCCATACGGC
GGCGAGTTGC TCGTGGATTT CACCAGCTTG CGGCCCCGTG GCCTGGCTCT CGCCTTTGCA
CGGGGCCTGT TCATGCTGGT CGCTCCGCGT GGCCCCATCA TGGTGCGTTC GTCGATCAAG
ACATACGTCA CACAGTTGCC GAGCTTCTTT GCCTATCTTG CCGGGACAGG CGACCGGATC
AACGGCCCGG CAGACCTTCG CGCCGACCAT ATCGACGGGT TCGAGAGGTG GCTCGCCGCG
AAGGGCAAGT CGCGCGTGCA CGCGCCGACC TATGTCGCCA AGGTCGTCTC CGTCCTTCGC
CGCATTGCGG CCGATGGTCC GGAGCTTGTC GATCCTGGCT TGCGGGAACG GCTGCGCTAC
ATCAGCTCGC ACCCCCACGT TCGCCCCCGT CCACGCGATG CCTACAGTCC GTATGTCGCT
CGCCAACTCC GCGATGCGGC ACGCGCCGAT CTTGTTGCGA TCGAGGCGCG CTTGCGGTCG
GGGTCGCGTT TCGATGAGGT GCCGGAGATA GAAGGCGCTT ACCGCCAAGC CCACGCTGCC
ATCGAAGCGC GCGGCGTGCT GCACCACCGT GATCCCGCAT GTCAGAGTCT GTATAAGCTG
CGGTGGATTC GCGAACTGAG CGGCGCAAGG TTCAACCTGG GCCTCCATGC TGCCCACTAC
CTTACTGCAC GCGACGTCGT GCCGCTTCTC GTTCTGCTCT CGCTGGAGAC GGGGCTTGAG
CTGGAGTGCT GCAAGTCGCT CACCATCGAT TGTTTGCGCA ACGCTTCGGG CGGCACCGTC
GATGTCGCCT ACACCAAGCT TCGCGCCCAC GGTGCCGAGC ACAAGACCAT CCGGGTCCGT
GATGGCGGCT CATCGACACC GGGCGGCCTG ATCCGGCGGA TTATCGCACT CTCCGCCAAG
GCCAGGGTGC ATAATTCCAG CGACAACCTT TGGGTCTATT ATCAGACCAA CGAGATCACT
GCTGGTATCC GCCATCCGCG CACGACGATC GACGCGTGGA CGCTGCGTCA CGGCATTGTC
GATGACGCCG GTCGACCGCT ACTCCTGCGC CTTTCGCAGC TACGCAAGAC CCACAAGGCC
CTGTGGTACC TCAAGACCGA AGGGCACATG GCCCGCTTCG CTGTTGGTCA TACCGTCGAG
ATCGCGGCAC GACACTACGC CGATATTCCG GCACTCAGAC CGCTGCATGA GCAGGCCGTG
GCGGACGCCC TCGAAGAAGC GCTGACCGGC CCGAGGATCC TTCCTCCTCC CGACGAGGAG
CGTCTGCGCG GCGCGTTGGC GAGCCCCGCG CCGGATGATG AAGGCGTCTC GCGCGCACTT
CTCGACGGCG AACAGGACGT CTGGCTTGCC AGCTGCGGCA ACTTCTATTC CAGTCCCTTT
GCATCTGCCG GTACCGCGTG CCCCACACCC TTCTGGGGTT GCCTCGATTG CCGCAACGCG
GTCATCACCG CGCGCAAGCT GCCCGCCATC CTCGCGTTCC TCTCCTTCGT CGATGATCAG
CGAGCCGGCC TGAGCGCGGC CGACTGGGCA GCCAAGTTCG GCCATGCCCG TGACCGGATT
GTTCAGCAGA TCCTGCCTGC CTTCGGCGAC GACGTTGTGG CAAGGGCCCG GGTGCAGGTC
GCGGCCGAAC CTCCCACGGT CTATCTGCCG CCCGAGGCCC GCGCATGA
|
|---|
| Protein sequence | MTAAPRKGRK VSFEAAATAP EADPWSQIST LRFLIDPPYG GELLVDFTSL RPRGLALAFA
RGLFMLVAPR GPIMVRSSIK TYVTQLPSFF AYLAGTGDRI NGPADLRADH IDGFERWLAA
KGKSRVHAPT YVAKVVSVLR RIAADGPELV DPGLRERLRY ISSHPHVRPR PRDAYSPYVA
RQLRDAARAD LVAIEARLRS GSRFDEVPEI EGAYRQAHAA IEARGVLHHR DPACQSLYKL
RWIRELSGAR FNLGLHAAHY LTARDVVPLL VLLSLETGLE LECCKSLTID CLRNASGGTV
DVAYTKLRAH GAEHKTIRVR DGGSSTPGGL IRRIIALSAK ARVHNSSDNL WVYYQTNEIT
AGIRHPRTTI DAWTLRHGIV DDAGRPLLLR LSQLRKTHKA LWYLKTEGHM ARFAVGHTVE
IAARHYADIP ALRPLHEQAV ADALEEALTG PRILPPPDEE RLRGALASPA PDDEGVSRAL
LDGEQDVWLA SCGNFYSSPF ASAGTACPTP FWGCLDCRNA VITARKLPAI LAFLSFVDDQ
RAGLSAADWA AKFGHARDRI VQQILPAFGD DVVARARVQV AAEPPTVYLP PEARA
|
|---|
| |