| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3870 |
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| Symbol | |
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| ID | 5077481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009426 |
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| Strand | + |
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| Start bp | 36333 |
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| End bp | 38513 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640480979 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001165641 |
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| Protein GI | 146275480 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.472213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT ATGGCTGCTA TTTCGTTGCC TTGATGGGAG CGACCGCGCT GACGCCGCAG
ATGGCCTTGG CACAAGACAT CACAAGCGAA TCGGACGAAT CCCACGCTAC CGACACGGGC
CTAGGTGACA TTATCGTCAC GGCCACTCGG CGCGAGGCCA GGCTGCAAAC CGTGCCGGTT
GCAGTTACTG CGGTTACCGG CGACGCTCTG GCTTCCGCCG ATGTTTCGAC GGTCCGCTCC
CTCACTCAGG TTGTGCCGGG CTTCATCGGC AGCCGTAATA TGGGCGTCTT CCAGCCGGTG
GTCCGCGGGG TCGGCTCAAC CGGCATTTCG GTTGGTGATG AACCCAATAT CGCAACCTAC
GTCGACGGCG TCTATCAACC GGAATCGGCC GCCAACTGGA TCGACCTGGT CGAGGTCGAA
CGGGTCGAGG TGCTGCGTGG CCCGCAGGGA ACGACCTTTG GCCGCAATGC CACCGGCGGA
CTGATCAACG TAATCACCCC CGATCCCAGC TTCGACTTCC GCGGCAAGGC TTCGCTGCGC
GTGGGGCGGA TGAGGCGCGA TGCCGGCGAT TACGATGCCC GGCTCTATTT CACCGGCCCA
ATGAGTGACA AGGTCGCGGC TGATTTTGCC GCGCTTTTCC GCAAGAACGA TGGCTATATC
GACGATCTGG TCCGCGGCGG CACACTTGGC AACCAGCGCG TCATCGACCT GCGTAGCAAG
TTGCTGTTCA AGCCGACCGA CAATTTCAAG GTGGTCCTGA CCGGGGAATA CTTCAATCAG
GAAAGCACCA CCAATTCGCC GCAACCGCTG GACGGCAACA CCGCGGGCCG CAACTGGCCG
GGCGTGATCG TACCGACCGA TGCCTGGCAG GCGTCGTTGA CCGAGGTTCC GCTGCTCAAT
CTCACAAGGT GGAGCTTTGC GCTGCACACC CGGCTCGATC TGGGCAGTGT GATGCTTGAG
ACCACCTCTG GTTTCCTCAA CCTGCGCTGG CAGCAGACCA CCGATGGCGA TGCCTCGAAC
ATCAAGCTTT CGAACTTCCC GGCAGTGTTT GAATCGGAGT CGGGCAGCCA GGAAATCAAG
CTGAGTTCGG CCAACCCCGG TCGCTTCCAG TGGCTGGTCG GCGGCTATTT CTACCAGTTC
GGCGGCGGCG CGCCGGTGCT TCAGCCTTGG TCCACGACCA ACCCGGCCTC GCCCCTGGCG
GGTCCGTCGC TCACGCCGAA GCTTGATGGG CGCTCATTCG CGGGCTTTGC CGAAGGCACC
TATGAGGTTC AGCCGAAGCT GTTCCTCACT CTTGGCGGGC GTTACACTAC CGAGACGCGC
TGGTTTAGCC AAAGTAACAA TGGCGTATTG CTGGTCGATG ACGTTTCAAA AACGTTCAAC
AAGTTCAACT ACAAAGTCGG TGTCCGTTAT GAGGTGACCG ACAAGACCAA CGTCTACGCC
ACCTACAGCA CCGCGTTCAA AAGCGGGGTG TACAACATGG CGGCAACCGG CGGCACCCCG
GTCAACCCGG AAAACATCAA GGCGGCTGAA TTCGGGATCA AGTCCGATCC GCTGGACTGG
CTGCGCACCA ACCTTGCCGT CTATTATTAC GACTACAAGG ATCTGCAGCT TCAGTCGAAG
GCCCCGACCG GCCCCGGATA CATCCTGCAA AACGCCGCCA ATGCCGAAAT CTATGGCGGC
GAGTTCGAGA CCACCATCAG CCCGGTCCGC GACCTGAGGC TGCGCGCGGC GGTTGCCTAT
ACCCATGCCC GCTACAAGGA TTTCCCCAAC GCCCAGGGAT TTACGCCGAT CGTCAGCGGC
AATGGCGACT TTGCCGGCAA CGTGGCGGCG CCGTTCGATG CATCCGGCAA GGTCATGACC
CGGGCGCCGG AATGGTCGGG TAATATCGGG TTTGATTGGG GCCATGACGT CGGCAATGGC
CGCGTCACCC TGGCAGGCAA TCTCCTGTGG AGTTCCCGGG TCTATTACGA CTTTGCCAAC
AGGTTCTCGC AGCGGCCCTA CACCCTGTCC AACCTTTCGA TCAATTGGCA GCCCGAAAGC
GAAGCCTTCA AGGTTGGGCT GTGGGTGACC AACTTGACCA ACGAAAAGGT CTTTCAGACC
ATACGTCCCG GAACGTTGGG CACCGACGGG TTCTACGAAC AACCGCGCAA GATCGGGATG
ACGATCGAGA CCAAATTCTG A
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| Protein sequence | MKKYGCYFVA LMGATALTPQ MALAQDITSE SDESHATDTG LGDIIVTATR REARLQTVPV
AVTAVTGDAL ASADVSTVRS LTQVVPGFIG SRNMGVFQPV VRGVGSTGIS VGDEPNIATY
VDGVYQPESA ANWIDLVEVE RVEVLRGPQG TTFGRNATGG LINVITPDPS FDFRGKASLR
VGRMRRDAGD YDARLYFTGP MSDKVAADFA ALFRKNDGYI DDLVRGGTLG NQRVIDLRSK
LLFKPTDNFK VVLTGEYFNQ ESTTNSPQPL DGNTAGRNWP GVIVPTDAWQ ASLTEVPLLN
LTRWSFALHT RLDLGSVMLE TTSGFLNLRW QQTTDGDASN IKLSNFPAVF ESESGSQEIK
LSSANPGRFQ WLVGGYFYQF GGGAPVLQPW STTNPASPLA GPSLTPKLDG RSFAGFAEGT
YEVQPKLFLT LGGRYTTETR WFSQSNNGVL LVDDVSKTFN KFNYKVGVRY EVTDKTNVYA
TYSTAFKSGV YNMAATGGTP VNPENIKAAE FGIKSDPLDW LRTNLAVYYY DYKDLQLQSK
APTGPGYILQ NAANAEIYGG EFETTISPVR DLRLRAAVAY THARYKDFPN AQGFTPIVSG
NGDFAGNVAA PFDASGKVMT RAPEWSGNIG FDWGHDVGNG RVTLAGNLLW SSRVYYDFAN
RFSQRPYTLS NLSINWQPES EAFKVGLWVT NLTNEKVFQT IRPGTLGTDG FYEQPRKIGM
TIETKF
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