| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4558 |
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| Symbol | |
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| ID | 5061048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5144848 |
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| End bp | 5146884 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476825 |
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| Product | hypothetical protein |
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| Protein accession | YP_001161364 |
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| Protein GI | 145597067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.102336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.516912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG GACGCTCCGG CGGCACACCG CCACCGAATC CCGAGGCGGC CAGCACCGCC
GGTGACCGAA AGCCCAAGAC CGACATGGAC AAGCTCGAAA CCGATCCGGG TGACGCCGGA
TCGCCCAAGG ACGGCCCCAC GACGGCCGAC ACCGCCGCCG CCGAGAGCAC TGCCGGGAGC
GCCGCCGCCG AGAGCACCGA CGACAAGGGC ACCGACGACA AGAGCACCGA CGACAAGAGC
GAGAAGAGTA AGAAGGAGAA ACGGGACCCG TTCGCAACCT TCGGCCCCGC TCCGACGCCG
GTGCCGACCC GCGTCGGCCG GGCAACCCGC GCCGTCGGCC GGTTTCTGGC GCACGAGTGG
ACGCTCGCGG CGCTCGGCTC GCTGGCCCTG GCCGTCGCGA TGACCTGGCC GACACTGCGC
TACCCGCGCT ACACCCTGCC CCAGGACTAC TGGGATCCGA GCCTTCAGGC GTGGCAGATG
GCCTGGTCCG GGCACGCGCT GTTGACCGAC CCGGGCCGGT TGTTGCACTC CAACGCGTTC
TTCCCGGAAC GGTGGAGCTT CGCCTTCTCT GACACCCTGC TGGGGTACGC CCCAGCGGGA
ATGATCGGCA CCGGCCCCGA AGCGGCCCTG CTCCGGTACA ACATCATGTT TGTGCTGGCC
CACGCCCTCG CCACGTTCGG GGCGTACGTG CTGGCCCGGC AGTTGGGATC GGGCCGCATC
GGTGCCGCGG TCGCCGGAGT GACCTACACA TACGCACCCT GGCTGCTGGC CCAGGCCGGG
CACCTGCACG TCGTCTCCAA CGGTGGTATC CCGCTGGCGC TGGCCATGCT CGCCCGGGGG
CACGGCTGGT CGCTACGGCA CGGCTACCGA CCGGAGAAGC GACGAGTCGG TTGGGTCTAC
GCCGGCTGGT TGGTCGCCGC CTGGCAGCTG AGCCTCGGCT TCGGCATCGG GCTGCCGTTC
GCGTACGTCC TCGCCGGGAT CGGGCTGGTC GCCACGGTGA CCTGGATCCT GCGGCGCTGG
GTCGTCAACC CGGTGCGGCG CCCCTTCGGC CGGCGGCTGT TCACCGCCGA CGTGGTCGGC
GGGCTGATCT TCGCCGCGGT CGGGGGGATG CTGGCGCTCC CCTACTTCAC CGTCGCCGAG
CTGCATCCGC AGGCGGAGCG GACCGCTGCC GACCTCGCCT GGTTCTCCCC GCCCGCGACG
GGCTTCCTCA CCGCGCCTGC CGAGTCACGG ATCTGGGGTG ACCTACACGA GGGGGCCCGG
GCGACGCTGC CCTGGCAGCC GGAGATGACG TTGCTGCCCG GGTACGTGCT CTACGCGCTC
GCCCTGGGCG GCCTCTTCTT CTCGGTCTGG CGGGTCCGGC ACCGGCTCCT GCTGCTGGCG
GGGGTCGTGG TCAGCATGGT GCTGGCGATG GGCACCGAAT TCCTCGACGG GCGGTACACC
TTCGTGCCGC TCTTCGAGCA CCTACCCGGA TGGAACGGCA TTCGTACGCC GGGCCGGCTG
ATGCTCTGGA CGACGCTGCT ACTCGGGCTG CTCGCGGCCG GCGCGGTGAG CGCCTTCGCC
GGCCGGGTAC GGAAGATCTC CGCCGCGCGG ATCCCCTCCT GGCCGAGCCC GTGGCTGCGG
TTGGCCACGC TGCTTCCGCT GCTGTTGGTG ACGGTCGAGG GGCTGAACCG CACCCCGCAC
CCGGTCGTTC CGGTGCAGCC CGCGGCGATG CGCACGGTGG ACGGCCCACT GCTGGTGCTG
CCGAGCGACC AGAGTCATGA CCAGCCGGTC ATGCTCTGGT CGACCACCCA CTTCCAGGAC
ATCGTCAACG GCGGAAGTGG CTTCACCCCG ACCCTGCTCG AGGAGGTACG TCGGGTGACG
ATCACCTTCC CCGATCAGGG CAGCGTCGAG TACCTGCGCA CCCTCGGCGT TCGTAACGTG
CTGATCCCTC GGAACCAGGT GGCCGGCACG CCGTGGGAGT TCAGCATCGA CGCGCCGGTC
GACGCGCTCG GCATCACCCG GGAGGAGATC GGCGACGTGG TCGTCTACCG CCTGTGA
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| Protein sequence | MTTGRSGGTP PPNPEAASTA GDRKPKTDMD KLETDPGDAG SPKDGPTTAD TAAAESTAGS
AAAESTDDKG TDDKSTDDKS EKSKKEKRDP FATFGPAPTP VPTRVGRATR AVGRFLAHEW
TLAALGSLAL AVAMTWPTLR YPRYTLPQDY WDPSLQAWQM AWSGHALLTD PGRLLHSNAF
FPERWSFAFS DTLLGYAPAG MIGTGPEAAL LRYNIMFVLA HALATFGAYV LARQLGSGRI
GAAVAGVTYT YAPWLLAQAG HLHVVSNGGI PLALAMLARG HGWSLRHGYR PEKRRVGWVY
AGWLVAAWQL SLGFGIGLPF AYVLAGIGLV ATVTWILRRW VVNPVRRPFG RRLFTADVVG
GLIFAAVGGM LALPYFTVAE LHPQAERTAA DLAWFSPPAT GFLTAPAESR IWGDLHEGAR
ATLPWQPEMT LLPGYVLYAL ALGGLFFSVW RVRHRLLLLA GVVVSMVLAM GTEFLDGRYT
FVPLFEHLPG WNGIRTPGRL MLWTTLLLGL LAAGAVSAFA GRVRKISAAR IPSWPSPWLR
LATLLPLLLV TVEGLNRTPH PVVPVQPAAM RTVDGPLLVL PSDQSHDQPV MLWSTTHFQD
IVNGGSGFTP TLLEEVRRVT ITFPDQGSVE YLRTLGVRNV LIPRNQVAGT PWEFSIDAPV
DALGITREEI GDVVVYRL
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