| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4557 |
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| Symbol | |
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| ID | 5061047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5144060 |
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| End bp | 5144851 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476824 |
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| Product | endonuclease IV |
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| Protein accession | YP_001161363 |
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| Protein GI | 145597066 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.110485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.612685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCG GAGCCCACGT CGATTCGTCC GACCCACTGG CGGAGGCGAC CGCACGAACC
GCCGACACCG TGCAGTTCTT CCTCTCCGAC CCGCAGGGCT GGAAGGCGCC GAAGCCACGA
ACGGACGCCG ACCGGCTACG CGACGCCGAG GTGGACCTCT ACGTGCACGC GCCATACGTG
ATCAACCTGG CCACGTTGAA CAACCGCATC CGGATCCCCA GCCGCAAGCT CCTGCTGGCG
CACGCCCAAG CCGCCGCCGC GGTCGGAGCC CGCGGCCTGA TCGTGCACGG GGGCCACGTC
AACGCGGGCG ACGACCTCGC CACCGGCTTC GACAACTGGC GCAAGGCCTT CGCGTACGCA
GCGGAATCCG GCGGCTTCGG CGTGCCGGTG CTGATCGAGA ACACCGCCGG CGGGGCGAAC
GCCTGCGCCC GCCGGCTGGA CGCACTCGCC CGGCTCTGGG ACGCGATCGG CGACCACGAG
GTGGGGTTCT GCCTGGACAC CTGCCACGCC TACGCGGGCG GTGAGGAGTT GCTCGGGCTG
GTCGACCGGA TCAAGGCGAT CACCGGGCGG ATCGACCTGA TCCACGCCAA CAACTCCAAG
GGCACCTTCA ACTCGGGTCA GGACCGGCAC GACAACCTGA CCGGCGGCAC GATCGACCCG
GAGCAGGTGG TGGCGGTGAT CCGCGCGGCG GGCGCCCCGG TGGTGGTCGA GACACCCGGC
GGGGCGGGCG GCCAGGCAGC CGACATCACC TTCCTCCGGG AGCAGCTCGG CATGCCGGCT
CCGACCGCAT GA
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| Protein sequence | MRIGAHVDSS DPLAEATART ADTVQFFLSD PQGWKAPKPR TDADRLRDAE VDLYVHAPYV
INLATLNNRI RIPSRKLLLA HAQAAAAVGA RGLIVHGGHV NAGDDLATGF DNWRKAFAYA
AESGGFGVPV LIENTAGGAN ACARRLDALA RLWDAIGDHE VGFCLDTCHA YAGGEELLGL
VDRIKAITGR IDLIHANNSK GTFNSGQDRH DNLTGGTIDP EQVVAVIRAA GAPVVVETPG
GAGGQAADIT FLREQLGMPA PTA
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