Gene Strop_4534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4534 
Symbol 
ID5061024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5121322 
End bp5122455 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content76% 
IMG OID640476801 
Producthypothetical protein 
Protein accessionYP_001161340 
Protein GI145597043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.557459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCACAA GCGGAGCGCA GGCTGCCGAA ATGGCCTCGA CCGAGCTCCC CCGGTTCTCC 
GTTCGCTCCC GCGCAGACCT GATCGCCGCC GTGCCCTATC TGCTCGGGTT CCATCCGGCG
GAGAGCGTGG TCGTGGTGGC GATGCGCGGC CCACGGGTCA CCTTCGCCGC GCGGGCAGAC
CTCGCGGACC TGACCGGGCC CGTCGCTGCG GACAGATCCG CCGGGGCAGT GGACGGTGCA
CCCGCTGCGG GCGGGCCTGC CGAGGTGGCC CGACACCTGG CGGCCGTGGT TGCCCAGCAG
CCCACCGACC GCGCGACGGT GCTCGGATAC GGGCCCGCGT CCCGGGTCAC CCACGCGGTT
GACGCCGTTC GGCAGGCCCT CGCCGAGGTC GGGATCGGGG TGCTCGACGC GCTCCGAGTC
ACCGGTGGCC GCTACTGGTC GTACCTCTGC CAGGAGCCGG AGTGCTGTCC GCCCGACGGC
ACCGCGTACG ACTCGGGCAC GAGCCAGGTG GCCGCCGCCG CGGTCCTCGC CGGTCAGGTC
GCTCTGCCCG ATCGGGCGGC TCTCGTGGCC CAGGTGGCGT CGGTCGAGGG CGACGAGCGA
GCTCGGCTGC GGCGGGCTGC GCAGCGGGCG GGGCGGCGCT TCGCCGACCT GGTGATCCGG
GTGCCCGGGG CCAACCGGTC GGGCGGGCGG TCGGTGCGGG CGGCGGGGAG CACCGCGATC
CGGGCCGCTC AGCGTCGGCA CCAACGGGGC GAACGGCTCG ACGATGACGA AGTGGCCTGG
CTGACCTGGC TGCTGACCGA CCTGACGGTG CGGGATCTCG CCTGGGAGCG CACCGACGGG
CGGGACGCCG ACATCGCGCT CTGGGCCGAC GTGCTCCGCC GGGCCGAGCC GGAGCTCATC
GCCGCCCCCG GTTCGCTGCT GGCCTTCGCG GCATGGCGGG CTGGGGAGGG GGCGCTGGCG
GCGGTGGCGT TGGAACGGGT GCTCGCCCCG CATCCCGACT ATTCACTCGC GCTGGTGGTG
GACGACCTGC TTCGGCGTGG TGTGCCCCCG ACGCGTCTGG CCCGGTGGCC GGCCGTCGCG
CTGCCCGGCG TGGTTCGTCC CCGCCCCCGG CGGGGCCGGC GGGGTGCCCG CTGA
 
Protein sequence
MVTSGAQAAE MASTELPRFS VRSRADLIAA VPYLLGFHPA ESVVVVAMRG PRVTFAARAD 
LADLTGPVAA DRSAGAVDGA PAAGGPAEVA RHLAAVVAQQ PTDRATVLGY GPASRVTHAV
DAVRQALAEV GIGVLDALRV TGGRYWSYLC QEPECCPPDG TAYDSGTSQV AAAAVLAGQV
ALPDRAALVA QVASVEGDER ARLRRAAQRA GRRFADLVIR VPGANRSGGR SVRAAGSTAI
RAAQRRHQRG ERLDDDEVAW LTWLLTDLTV RDLAWERTDG RDADIALWAD VLRRAEPELI
AAPGSLLAFA AWRAGEGALA AVALERVLAP HPDYSLALVV DDLLRRGVPP TRLARWPAVA
LPGVVRPRPR RGRRGAR