| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4462 |
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| Symbol | |
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| ID | 5060951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5055703 |
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| End bp | 5056452 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 640476728 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_001161268 |
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| Protein GI | 145596971 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.18795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTGA CCATCTCCAG CCACACCCAC CCCCGCTCGC TGCTGGCCAT GCTCACGCTC
ACCCCGGTGC TGCGGCTCGC CGCCGTGCGG CACGCCGTAC CCGTGGGGGT CACGGCCCGG
CTCGGCTGCG ACGCCTGCGG TGCCCCGATC GGCCTGGCCC AACCGGGGCC GGCGATCGGG
CCGCGCGCCC GGTGCGGCGG GTGCGGCACG CGGGTCGGCC CACCACCCGG CTCGGTGGAG
GTCGCCGTGC TCGCCGCCGG CCTGGCGCTG CTCCTGGCCG GCCCACCCGT CATCGAGCTG
GCCGCGGCGG CCTGGTGGCT CGGCTGGGCG GTACCGCTCG CGTTCGTTGA CGCCGCGGTG
CACCGACTGC CGGACCGACT CACCGGCCCC GCCGCGCTCG GCACCTGGCT GCTGCTCGGC
CTGGCCGCGA CCCTCGACAC CGGGTACGCC CCCTGGCTGC GCGCCACCGC CGCCGGGCTC
GGCCTGGGCC TGCTCTTCGC CACCAGCACC CTCCTGCTCG GCCGGCGCGG CTTCGGCCTC
GGCGACGCCA AACTCGCGGT CGGCGTGGGC CTGCTCCTTG GCTGGCACGG CTGGCCCTTC
CTGGTTCTGG GGCTGCTGCT CGCCTTCACC TTCGCCGCCG TGACCGCCCT GGCGCTGCTC
GCCACCGGGC GGGCCCGCTG GTCCAGCCAC CTGCCCTTCG GCCCGTTCCT CCTGCTCGCC
ACCCCGACCA CGCTCCTGCT CACCGGCTGA
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| Protein sequence | MSVTISSHTH PRSLLAMLTL TPVLRLAAVR HAVPVGVTAR LGCDACGAPI GLAQPGPAIG
PRARCGGCGT RVGPPPGSVE VAVLAAGLAL LLAGPPVIEL AAAAWWLGWA VPLAFVDAAV
HRLPDRLTGP AALGTWLLLG LAATLDTGYA PWLRATAAGL GLGLLFATST LLLGRRGFGL
GDAKLAVGVG LLLGWHGWPF LVLGLLLAFT FAAVTALALL ATGRARWSSH LPFGPFLLLA
TPTTLLLTG
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