| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4455 |
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| Symbol | |
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| ID | 5060944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5049028 |
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| End bp | 5049894 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476721 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001161261 |
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| Protein GI | 145596964 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.21053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAACT GGCTGTTGAC CATCGCGGTG ACCGCCGGGG CGCTGGGCGG GCTCGGGGTC
TTCCTGGTGG TCCGGGAGCT CCTTCCGGCG ACCCCGGCAC TCGGTCCCGC GCTGCGGCGG
CTGCACCAGC CGTCGGGGTC CCACCCGGCC CGGCCCGCCG ACCACCGGCT GGAGTGGCTG
ACCGAGCTCG CCCGGTGGCT GCGTCCACCG CACCAACAGC TCGCCCTGCT CGGCCGAACC
CCCGAGCAGT ACGCCCTGTC GCTGCTGCTC TCCGCGTTGA TCGGGCTCGC CTCGCCGACC
CTGCTCAGCG TTACGTTCGC CGTCACGGGG GTTGGGCTGC CGGTGGCCGT ACCGGTGCTG
GGCAGTCTCG GCCTGGCGCT GGTCTGCGCG TGGCTCGCAC ACCGCGCGGT GTTGACCAAG
GCGGAGGCGG CCCGCAGCGA GTTCCGGGCC GCCGTCTGCA CCTATCTGGA TCTGGTGGCG
TTGCAGCTCT CGGCCGCGCA CGGGCCGGTG CAGTCGCTGG AGCGCGCGGC GGAGGTCTGC
GACGGTTGGG TATTCGACCG GATCCGGGAG TCGCTGCGCC TCGCCCAGCT ACAGATGCAC
TCGCCCTGGG ACGAGTTGCG GGAGCTCGCC GACCAGATCG GCATTCCCGA GCTCGGTGAC
GTGGGCGCGA TCATGCGCTC CTCGGGCAGC GAGGGTGCGC AGGTGCACGA GACCCTGCGC
AGCCGTGCCG ACTCGCTACG CGACCAGATC CGCACCGACA ACCTGGCTCG GGCGGAGGGG
GTGACCGGCC GACTGGATAT CCCGGGTGCC CTGCTCGTCT TCGTACTGCT TGGTTTCGCG
ACCTACCCGT TCCTCGCCCG CCTCTGA
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| Protein sequence | MTNWLLTIAV TAGALGGLGV FLVVRELLPA TPALGPALRR LHQPSGSHPA RPADHRLEWL
TELARWLRPP HQQLALLGRT PEQYALSLLL SALIGLASPT LLSVTFAVTG VGLPVAVPVL
GSLGLALVCA WLAHRAVLTK AEAARSEFRA AVCTYLDLVA LQLSAAHGPV QSLERAAEVC
DGWVFDRIRE SLRLAQLQMH SPWDELRELA DQIGIPELGD VGAIMRSSGS EGAQVHETLR
SRADSLRDQI RTDNLARAEG VTGRLDIPGA LLVFVLLGFA TYPFLARL
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