Gene Strop_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4450 
Symbol 
ID5060939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5046633 
End bp5047118 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content71% 
IMG OID640476716 
Producthypothetical protein 
Protein accessionYP_001161256 
Protein GI145596959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.283918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACCGC GGGTGTCCCC AGTGATCGCC GTGCCCACCC GTCGGGACGA CTCGGGCCGC 
ACCGACTCGA GCCGCACTGA CTCGGGCCGG GTCAGTGTTT TCCTGGCAAT CGCCGCCCTG
GGAATACTCA CCGTTGTGGC GCTCGCCTTC GATGGGGCCG GGCAGCTGCG TGCGCTGCAA
CGAGCCGACA ACCTCGCCAG CGAGGCCGCC CGTGCCGGGG GGCAGTCGAT CGATCTGGTC
AGCGCGATCG AGGGAGGGCC GAAGCGGATC GACGAGCCGC AGGCGCGGCG GGCGGTGACC
GAGTATCTCG CCGCCGCCGG TGCCAGTACC CACACCGTCA GCTTCCCGGT GGTTGACGGG
GAGACCGTGG TCCGGGTGCG GGTCACCGTC ACCTACGAGA GGTCGCTGCT CGGCCTCGTC
GGCTTCGACG ACACCGTCAA CGTCACCGGG GAGGCGACCG CTCGGGCGCT GACCGGCGGA
CCGTAG
 
Protein sequence
MVPRVSPVIA VPTRRDDSGR TDSSRTDSGR VSVFLAIAAL GILTVVALAF DGAGQLRALQ 
RADNLASEAA RAGGQSIDLV SAIEGGPKRI DEPQARRAVT EYLAAAGAST HTVSFPVVDG
ETVVRVRVTV TYERSLLGLV GFDDTVNVTG EATARALTGG P