| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4445 |
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| Symbol | |
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| ID | 5060934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5041088 |
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| End bp | 5042884 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640476711 |
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| Product | ABC transporter related |
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| Protein accession | YP_001161251 |
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| Protein GI | 145596954 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.307141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAA CGCGGCAGCA ACACGCCGAA AGCGGCGAAG CACGAGCCCC CCGCGATGAC
TTCTTCGCAC CTGTCCGCGG CAGCCTCGCG GGGATCGTGC TGCTCAGCGT GATCGGTGCG
GCGACCGGAG TGGTCCCGTT CATCGCGATC GTTGAGCTTG CGCGTGCTCT CCTGCCGTCC
CTGTCGACCG GCGAGGTGGA CACCTCCCGG GTCTGGACCA TTGTGGCCCT GGCGGTGGTG
GCTCTGCTCG TCAGCTTCAG TACCGCGGTC GGGTCGGGCA TGGTCAGCCA CCTGGCCGAC
GCGGAGCTAC AGCTTTCGCT GCGGCAGCGG ATCATCCGTC ACCTTCAGCG CCTGCCGCTG
GGCTGGTTCG ATACGCGTAC CTCCGGAACG GTGCGCAAGA TGGTCGAGAA CGACGTGATC
GCGCTGCATC AACTCGTTGC GCACGGGATC CAGGACGTCG TCACCGCGAT CACCGTGCCC
GTCATCGGCA TCGTCTATCT GTTCGTCGTG CAGTGGCAGT TGGCCCTGGT CGCGCTGGTG
CCGGTTCTTC TCTCGATCGT GCTGTACGCG TTGATAATGC GGGGCGGCGC GGAGAAGTTC
GCACAGTACG ACGCGGCGAC CGAACGCCTG TCCGGTGCCA CCGTGGAGTT CGTTCACGGC
ATCGCCGTGG TCAAGCGGTT TGGCCAGGTT GGTCGCAGTC ACCGCCGCTA CCACGACCAG
ATGCGGCAGT ACGTCGACTT CATTGGGCGA TGGACCCGGG ATACCGCGCC GTTGCAGGGC
ATCGCTGAGG TCGTCACCTC CCCGGTGGTC GTGCTGGTCC TCCTGCTTGC CGCCGGTGCC
CACCTGGTGT CCAGTGGTGA GGCCGAGCCC ATCGATGTGC TCCCCGGGCT GTTGTTGGGG
CTTGGGCTGA CCGGGCCGTT GATGAAACTC GCCTCCTCGG CGCAGTTCCT GCGCAACGCG
GCAAAGGCGC ATGAGTCCCT CGCGAGGTTC TTCGCCCTGC CGTCGGTACC CGAGGCCGGC
TCGCCCGCCA CGCCGGACGG CCATGACATC GGATTCGAGC GGGTCTCGTT CAGCTACGAC
GGCCGACACC AGGTGCTGCA CGACATCGTC GCGGCCTGCG CGCCAGGTAC CGTCACGGCG
CTCGTCGGGG CCTCCGGTTC GGGTAAGTCC ACGATGGCCA AACTGGTGCC GCGGTTCTAC
GATGCGTCGG CGGGACAGGT CACGATCGGC GCGGCGGACG TCCGGCAGAT CTCATCGGAG
CAGCTGTACC GCGAGGTCGG GTTCGTGTTC CAGGACGTGC GGCTGTTGCG CACGAGCCTG
CGCGACAATA TCCGGCTCAC GCGGCCCGAC GCCACGGACG AGGACGTCGA GCGGGTGGCG
CGCGCGGCGC AGATCCACGA CCGAATCCTC CGCTTCGAGC GAGGGTATGA CTCCGTCATT
GGTGTCGATG CGAACCTCTC CGGTGGTGAG GCGCAACGGG TGACGATCGC TCGTGCGCTG
CTCGCCGACG CCCCGATTCT GGTGCTCGAC GAGGCCACCG CGTTTGCCGA CCCGGACTCG
GAGGCGGCGA TCCAGGCTGC ACTCGGCGAG CTCACCACCA ACCGCACCGT CCTGGTGGTC
GCCCACCGCC TGCACACCAT CGTCGGCGTC GATCAGATCC TCGTCCTCGA CGCGGGGCGG
ATCGTCGAGC GCGGTACGCA CCCGCAACTC GTCGCCGCAG GCGGGCGCTA CGCACGGATG
TGGTCGCGCT ACCAGGCGAA CCAAGCGACT GCCGTTCCGG AAGGAGTCAA GGGATGA
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| Protein sequence | MATTRQQHAE SGEARAPRDD FFAPVRGSLA GIVLLSVIGA ATGVVPFIAI VELARALLPS
LSTGEVDTSR VWTIVALAVV ALLVSFSTAV GSGMVSHLAD AELQLSLRQR IIRHLQRLPL
GWFDTRTSGT VRKMVENDVI ALHQLVAHGI QDVVTAITVP VIGIVYLFVV QWQLALVALV
PVLLSIVLYA LIMRGGAEKF AQYDAATERL SGATVEFVHG IAVVKRFGQV GRSHRRYHDQ
MRQYVDFIGR WTRDTAPLQG IAEVVTSPVV VLVLLLAAGA HLVSSGEAEP IDVLPGLLLG
LGLTGPLMKL ASSAQFLRNA AKAHESLARF FALPSVPEAG SPATPDGHDI GFERVSFSYD
GRHQVLHDIV AACAPGTVTA LVGASGSGKS TMAKLVPRFY DASAGQVTIG AADVRQISSE
QLYREVGFVF QDVRLLRTSL RDNIRLTRPD ATDEDVERVA RAAQIHDRIL RFERGYDSVI
GVDANLSGGE AQRVTIARAL LADAPILVLD EATAFADPDS EAAIQAALGE LTTNRTVLVV
AHRLHTIVGV DQILVLDAGR IVERGTHPQL VAAGGRYARM WSRYQANQAT AVPEGVKG
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