Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4404 |
Symbol | |
ID | 5060890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4981509 |
End bp | 4984220 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640476667 |
Product | peptidase S45, penicillin amidase |
Protein accession | YP_001161210 |
Protein GI | 145596913 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.676732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATCCTG TACGCGTTCT TTCGCCCCGG GTGCGTAAGG TCGCGCTCTG GACCGTGGCG GTCGTCACCG CGCTGGCCCT CGTGCTCACC CTCACCGCCG TGTGGACGGT GCGGCGAGCG TTCCCGCAGC ACGACGGCGG GCTTCGGCTG CCCGGGCTCA CCGCGCCGGT CACCGTGCAC CGCGACGATC ACGGCATCCC GCAGGTGTAC GCGAAGACTG CCGAGGACCT GTTTCGTGCC CAGGGCTACC TCCACGCGCA GGATCGGTTC TGGGAGATGG ACTTCCGCCG CCATCTGACC GCGGGTCGAC TCGCCGAACT CTTCGGTGAG AGCCAGGTGG AGACCGATAT CTACCTCCGG ACGATGGGTT GGCGTCGGGT CGCCGAGCAG GAGTGGGGCC TCCTCGGGGT GGAAACCAAG CGCTACCTGC AGGTGTACGC CGACGGGGTG AACGCCTGGC TCGACGAGAA CGACGGGGGC CGGGCGAGTC TGGAGTACGC CGTACTCGGC CTGCAGAACT CGGGCTATGA GATCGAGACG TGGCACCCGG TGGACAGCAT CGCCTGGCTG AAGGCGATGG CGTGGGACCT GCGCGGCAAC ATGAGAGACG AGATCGCCCG GGCGGCACTG CTCGCCGAGG GCCTGAACCG CCAGCAGGTC GAGGAGCTGT ATCCGGCGTA CCCCTTCGAC CGGCATGAGC CGATCGTCAC CACGGGCGGC ATCGTGGATG GTGCCTTCGA TCAGGAAGTC ACCCCGGCCT CCCCGGACCC GGTCGACGGC TCGGTCTCCG ACGGGACCGA GACCGCCGGA GTGGGCGGGG GTGTGCTCAC CGCGGAGCCG GCCGGACCCA TCGCTGGCAC GGCTGTCGTG GAGATGGTCA CCGCGTTGGC CGGCGGGCTG TCCCGGCTGC CGGCCGTGTT GGGTGCCGGT CGGGGCATCG GCTCCAACTC GTGGGTTATT GACGGCGACC TGACCGACAC CGGGAAGCCG ATCCTCGCCA ACGACCCGCA CCTCGGTCCC AGCATGCCCG GCATCTGGTA CCAGATCGGC CTGCACTGTG CGTGCGACAT CAACGTCTCC GGCTTCAGCT TCTCGGGCAC ACCGGGGGTG GTCATCGGGC ACAACGCCCG CGTCGCGTGG GGCTTCACCA ATTTGAGCCC CGACGTCACG GATCTGTATC TGGAGCGGGT GGACGGCGAC CGGGTGCAGG TCGACGGAGA ATGGCAGCCG CTGGAGACCC GCACCGAAAC CATCAAGGTC GCCGGCGGCG AGGACGTGTC CATCACCGTC CGGGCCTCCG GGCACGGACC CCTGCTCTCC GACGCGTCGG CCGAACTGCG CGATATCGGC CTTGCTCCGC CGGTCGACCC GGCGGGTTCA CCGGCGTCGG TCGCTGCCAC CCCGGAGCTA CCCCCCGACG AATCGGCGAC CACCGACGAC GAGCAGCGCG ACGGCTACGC CATCGCGCTG AGCTGGACCG CACTCGCGCC GGGCCGGACC GCCGACGCCA TCTTCACGCT GAACACCGCG ACGAACTGGG CCGACTTCCG CGCCGCGGCG GCGCTGTTCG AGGTGCCCGC GCAGAACCTC GTCTACGCCG ACATCGACGG CAACATCGGC TACCAGGCGC CCGGTCGGAT CCCGGTGCGG GGCAAGGGGG ACGGGCGGTG GATGGCGCCG GGATGGGACT CGGCGTACGA CTGGCAGGGT TTCATTCCCT TCGCGGAGTT GCCGAGTGTC CTCAACCCAC CCGCCGGCTA CCTGGTCACG GCCAATGAGG CTGTCATCGG CCCCTCGTAC CCGTACCTGC TCACCACCGA CTGGGCCTAC GGCTACCGCA GTCAGCGCAT CCACGAGCTG ATCGACTCGG CGCGGGGTGC CGGAAAGATC ACCGTCGCGG ACGTGCAGTC CATGCAGTTC GACAACCGCA ACGGTTTCGC GTCGACGCTC GTCCCGGCGG TCGAGGCGGC TCTCGACGCC GGCACCTCGG GCCTGGTCCG GTCCGCCACC GACCTATGGG CGGAGTGGGA CTACCAGCAG CCGGCTGAGG GCGAACCGGG CACCGACGAC GGGCGCCGCT CCGCCGCGGC GGCGTACTAC AACGCCGTCT GGCGGCACCT GCTCCTGGCG ACCTTCGACG AACTGCCGTC GGACCACCGG CTCGACGGCA ACGACCAGTC GTACGAGGTG GTGCGGGGGC TACTCAGCCA GCCCGATGCA CTGTGGTGGG ACCGGACGGA GACCGAGGTC GTCGAGGTAC GCGACGACAT TCTGCGCGCG GCGGCCGAAG CGGCGGCCAG CGAACTCTCC CGCGACCAGG GCGACCAGCC GGCCGACTGG CGCTGGGGCC GGATGCACAC CCTGACCGTA CGGAACCAGT CCTTCGGCAC CTCGGGCGTG GGGATCATCG AATGGCTCTT CAACACCGAC CCCGTCAGCG TGTCGGGAGG TGGCGCGATC GTCAACGCCA CCGGCTGGAA CGCCGCCACC GGGTACGAGG TCAACGCCGT ACCGTCCATG CGGATGATCG TCGACCTGGC GGACCTGGAC GCCTCTCGGT GGATCCAGCT GACCGGCAAC TCCGGGCATG CCTTCCACCG CAACTACGAC GACCAGCTGG AGCTGTGGCG TACCGGCGAG ACCCTGCCGA TGCGCTGGGA GCGAGCCACG ATCGAGGCCG AGGCGGCGCA GACGCTCACC CTGGAGCCCT AG
|
Protein sequence | MNPVRVLSPR VRKVALWTVA VVTALALVLT LTAVWTVRRA FPQHDGGLRL PGLTAPVTVH RDDHGIPQVY AKTAEDLFRA QGYLHAQDRF WEMDFRRHLT AGRLAELFGE SQVETDIYLR TMGWRRVAEQ EWGLLGVETK RYLQVYADGV NAWLDENDGG RASLEYAVLG LQNSGYEIET WHPVDSIAWL KAMAWDLRGN MRDEIARAAL LAEGLNRQQV EELYPAYPFD RHEPIVTTGG IVDGAFDQEV TPASPDPVDG SVSDGTETAG VGGGVLTAEP AGPIAGTAVV EMVTALAGGL SRLPAVLGAG RGIGSNSWVI DGDLTDTGKP ILANDPHLGP SMPGIWYQIG LHCACDINVS GFSFSGTPGV VIGHNARVAW GFTNLSPDVT DLYLERVDGD RVQVDGEWQP LETRTETIKV AGGEDVSITV RASGHGPLLS DASAELRDIG LAPPVDPAGS PASVAATPEL PPDESATTDD EQRDGYAIAL SWTALAPGRT ADAIFTLNTA TNWADFRAAA ALFEVPAQNL VYADIDGNIG YQAPGRIPVR GKGDGRWMAP GWDSAYDWQG FIPFAELPSV LNPPAGYLVT ANEAVIGPSY PYLLTTDWAY GYRSQRIHEL IDSARGAGKI TVADVQSMQF DNRNGFASTL VPAVEAALDA GTSGLVRSAT DLWAEWDYQQ PAEGEPGTDD GRRSAAAAYY NAVWRHLLLA TFDELPSDHR LDGNDQSYEV VRGLLSQPDA LWWDRTETEV VEVRDDILRA AAEAAASELS RDQGDQPADW RWGRMHTLTV RNQSFGTSGV GIIEWLFNTD PVSVSGGGAI VNATGWNAAT GYEVNAVPSM RMIVDLADLD ASRWIQLTGN SGHAFHRNYD DQLELWRTGE TLPMRWERAT IEAEAAQTLT LEP
|
| |