Gene Strop_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4399 
Symbol 
ID5060885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4976078 
End bp4977226 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content74% 
IMG OID640476662 
Productcobalt transport protein 
Protein accessionYP_001161205 
Protein GI145596908 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.628473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.811207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA CCGCTGTGCA CGGCTCCACG ACCGCCGGCC GGTTCTCGGC CCGCTGGTCG 
GCCTGGCGAC TACCCCGAGG GCTACACCCA GGCGCCTGGT GGCTGTGGGC GCTCGGGCTG
GCCACCGCGG CCAGCCACAC CACCAACCCG CTGGGGCTCA CCCTGCTGGT CGCGGTCACC
GCGCTGGTGG TCGTACAGCG ACGCGGGCAC GCTCCCTGGG CGCTGGCGTT TCGCATGTAC
GTCTGGCTCG GCGTGGTGAT CGTCGCGATG CGGGTGGTGT TCCGGATCGT CTTCGGCGGC
GGCCAGGGCG AGTACGTGCT GATCCGGTTG CCGGAGATCC CACTGCCGGA GTGGGCGGCG
GGAATCCGCC TCCTCGGGCC GGTCGCCGCC GAGCAGGTCC TCGGTGGGTT CTACGACGGG
CTCCGGTTGG CGACGATGCT GATCTGCCTG GGGGCGGCGA ACGCCCTGGC CAACCCGAAG
CGGCTGCTCA AGGCCGTACC GGGAGCGTTG TATGCGGTGG GCACGGCGGT GGTGGTCGCA
CTGTCGGTCG CCCCGCAACT GGTGGAGAGT GTGCTGCGGG TCCGTCGGGC GCGGCGGCTG
CGGGGCGCGT CCGGGCGGGG GATGCGGGCG TTTCGGGGAG TCGCGCTTCC GGTGTTGGCC
GACGCGTTGG ACCGGTCGCT GGCCCTCGCC GCGGCGATGG ACTCACGCGG CTACGGCCGG
ACCGAGGCGG TTCCCGCCGG GCAGCGGGCG GTCACCGGCG CGCTGGTGCT CGGCGGCCTG
GTCGGTGTCT GCGCCGGCAC CTACGGACTG CTCGACACCT CCGGGCCCGG CTACCTGGGG
CTGCCGATGC TCCTCGCCGG ACTTGCCGCC GCGGTGGGCG GCATGCTGCT GGCCGGCCGC
CGGGTCCGCC GCAGTCGCTA CCGGCCGGAC CGCTGGCGGC TGGCCGAGCT GCTCGTCGCC
GGTTGCGGGA TGGCCGCGGC CGGCCTGACG GTGCTGGCCG GCACGACCGA CCCGGAACTG
CTCTACCCCC CGGTAAGTCC ACTCACCTGG CCCGAGCTGA CCCCGCTGCT GCTGCTCGCC
GTCGCCGTCG CGGCCGCCCC GGCCTGGCTC GCGCCGCCGC CGACAGCTGT CACGAGAGAT
CACACATGA
 
Protein sequence
MTDTAVHGST TAGRFSARWS AWRLPRGLHP GAWWLWALGL ATAASHTTNP LGLTLLVAVT 
ALVVVQRRGH APWALAFRMY VWLGVVIVAM RVVFRIVFGG GQGEYVLIRL PEIPLPEWAA
GIRLLGPVAA EQVLGGFYDG LRLATMLICL GAANALANPK RLLKAVPGAL YAVGTAVVVA
LSVAPQLVES VLRVRRARRL RGASGRGMRA FRGVALPVLA DALDRSLALA AAMDSRGYGR
TEAVPAGQRA VTGALVLGGL VGVCAGTYGL LDTSGPGYLG LPMLLAGLAA AVGGMLLAGR
RVRRSRYRPD RWRLAELLVA GCGMAAAGLT VLAGTTDPEL LYPPVSPLTW PELTPLLLLA
VAVAAAPAWL APPPTAVTRD HT