Gene Strop_4398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4398 
Symbol 
ID5060884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4975192 
End bp4976085 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content76% 
IMG OID640476661 
Producthypothetical protein 
Protein accessionYP_001161204 
Protein GI145596907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.344761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.772732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCGCA GGACGCTCCG CGGCCCGGTG GCCGTCGCTC TGGTCGTCGC CGGCTCGGTG 
ATCGGGCCGG GGAGCCCGGC GACCGCCGCC GGGTCCGCCG GCTACTGCCC GGACGCCTCC
GGCGTCACCG TCGTGGTCGA CTTCAACGAA CTCGGGGGCG GGACGGTGGT CCGCTGCGCC
CCGGGCAGCC AGGCCACCGG GCTGGCGGCG CTGAAGAACG CCGGGTTCCA GATCACCGGC
ACGCTGCGCT GGGGCGAGGG GTTCATCTGC CGGATCGGAG GCAAGCCGTC GGCTGCCGCG
GAGAAGTGTG TCGACACCCC TCCGGCCAGC GCCTACTGGT CATACTGGCA CGCCCCGAAC
GGCGGTAGCT GGACCTACAG CGACAAGGGG GTGCTCAACC GTACGCCCCC GGCGGGCAGC
TTCGAGGGCT GGTCGTTCTC CCTCAACCGG GAACCCAACA ACGCCCCCCG CCCGGGGGTC
ACCCCGAGCC GACCCGCGCC GCCGCCACCC GCCTCGCCGC CGGCGCCGCC CACACCCCCG
CCGGTGACCG ACGTACCGGT GGCACCGCCG GCGGCGGGCG GAAGCGTCGC GCCGCCGGCC
ACCGGCGCTG AACAACCCGG TGCGGTCGAC GGGCCGACCC ACACCGTCGG CCCGTCGACC
TCCGCCTCCA CCTCGCCGTC GGCCAGCGCG GGGGGCGCCC CGTCCCCGGC GACTGCCACC
GCCTCGGCGC AGCCCAGCTC CGCCGACGAG CCCGTCCTGA CCGACGCCGT CGCCTCCCGC
GAGGAGAGTG GGGTGCCGCT GGGCACGCTG GCCGGGGTGC TGCTGCTGGC CGTACTGACC
ATAGGGGGCC TGGTCGCCGC CCGGCGACGG CGTGCCGCCG ACCCACATGA CTGA
 
Protein sequence
MSRRTLRGPV AVALVVAGSV IGPGSPATAA GSAGYCPDAS GVTVVVDFNE LGGGTVVRCA 
PGSQATGLAA LKNAGFQITG TLRWGEGFIC RIGGKPSAAA EKCVDTPPAS AYWSYWHAPN
GGSWTYSDKG VLNRTPPAGS FEGWSFSLNR EPNNAPRPGV TPSRPAPPPP ASPPAPPTPP
PVTDVPVAPP AAGGSVAPPA TGAEQPGAVD GPTHTVGPST SASTSPSASA GGAPSPATAT
ASAQPSSADE PVLTDAVASR EESGVPLGTL AGVLLLAVLT IGGLVAARRR RAADPHD