Gene Strop_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4396 
Symbol 
ID5060882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4972908 
End bp4973399 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content73% 
IMG OID640476659 
Producthypothetical protein 
Protein accessionYP_001161202 
Protein GI145596905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.816365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGT CCCACCTTCG CACCACCGTC CGCACCCGCG TCGCCGGCCT GCTGGCCGCC 
GCCGTCGCCG GGATCGCCCT GACCGCTGTC GAGCCCGCCC CCCAGGCGGC GCACGCCGAC
GCCTGTGACG GCACGTCGGG CGTCACCGTG GTGGTCGACT TCACCGCGTT CGGCGGCGAT
GTCGAGGTCG CCTGCGCCCC CGGTGACCCG GACACCGGGC TGGCCGCCCT ACAGGACGCC
GGCTTCGCCG TCGAGGGCAC CCTCCGATGG GGACTCGCCT TCGTCTGTCG GCTCGACGGC
CTACCCGCCC CGGATGTCGA GCCGTGCATC GACACCCCGC AGGCCACCGG CTACTGGTCG
TACTGGCACG CCGCCAGCGG CGGTGACTGG GAGTACAGCG ACAAGGGCGT ACTCAACTAC
GACCCCGCCC CGGGCAGCAT CGAGGGTTGG TCCTTCGGCG GCAGCACCCC GCCGAGCATT
CCCGCCCCCT GA
 
Protein sequence
MVVSHLRTTV RTRVAGLLAA AVAGIALTAV EPAPQAAHAD ACDGTSGVTV VVDFTAFGGD 
VEVACAPGDP DTGLAALQDA GFAVEGTLRW GLAFVCRLDG LPAPDVEPCI DTPQATGYWS
YWHAASGGDW EYSDKGVLNY DPAPGSIEGW SFGGSTPPSI PAP