| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4369 |
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| Symbol | rpsD |
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| ID | 5060855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4944183 |
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| End bp | 4944791 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640476632 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001161175 |
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| Protein GI | 145596878 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACCAGC CCCGCCCCAA GATCAAGCGC TCCCGCGCCC TCGGCATCCC CCTGACCCCG
AAGTGCGTGC GCTACTTCGA GCGCCGCCCC TTCCCGCCCG GTCAGCACGG CCGATCCCGC
AAGAGCACCA GCGACTACAA GATCCGGCTC CTGGAAAAGC AGCGACTCAA GGCGCAGTAC
CACGTCAACG AAGGACAATT ACGGCGTGCG TTCACCCGCG TCGCCCGACT CGAGAGCAAG
ACCGGCGAGG CCCTCATCGT CGACCTGGAG ACCAGGTTGG ACGCACTGGT GCTGCGATCC
GGGCTGGCGC GGACGATCTA CCAGGCGCGG CAGACAGTCA CTCACCGACA CATCACTGTT
AACGGACGCC GGGTCGACCG TCCTTCGGCA CGACTGCGCC CCGGTGATGT CATTGCCGTC
GCCACCGGCA GCCGTACCAA GGCGCCCTTC CTTGTCGCGG CGGCCGGGGC GCACGCAGCG
GAACGCTCTG CGCCCTACCT GGCGGTCAAC CTCGCCGACC TGACCGTACG ACTGATCCGG
CTACCGCTGC GCTCCGAGGT GCCGGTGACC TGCCAGGAAC AACTCGTCGT CGAGTACTAC
TCACGCTGA
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| Protein sequence | MNQPRPKIKR SRALGIPLTP KCVRYFERRP FPPGQHGRSR KSTSDYKIRL LEKQRLKAQY
HVNEGQLRRA FTRVARLESK TGEALIVDLE TRLDALVLRS GLARTIYQAR QTVTHRHITV
NGRRVDRPSA RLRPGDVIAV ATGSRTKAPF LVAAAGAHAA ERSAPYLAVN LADLTVRLIR
LPLRSEVPVT CQEQLVVEYY SR
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