Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4341 |
Symbol | |
ID | 5060826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4918851 |
End bp | 4919366 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640476603 |
Product | hypothetical protein |
Protein accession | YP_001161147 |
Protein GI | 145596850 |
COG category | [S] Function unknown |
COG ID | [COG4270] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.440484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCC CCGTTCTCCT TGTCGCGCTG GCCGTCCTAC GCGGCCTTGG GGCGCTGGGC GTGCGCCGAT TCGTGACCTG GCCTTCGGCC GCCGCGCACG CCCTGGCGAT CATGCTGTTC ATGACCGCCA CAGCCCACTT CGTGCCGGGC GGCGTCACCG TCATGCCGAC CCACGACGAT CTGGTGGCGA TGGTGCCGCC TCTGGTGCCG CTTCCATCCC TGGTGGTACA CCTCACCGGT GTGCTCGAAA TCCTCGGCGC ACTCGGCCTC ATACTCTCCC GCACTCGCCG GGCTGCCGGA TACTGCCTCG TGTTGCTGTT CGTCGTTCTG CTTCCTGGGA ACATCTACGC CGCCACTGCT GAGGTCCCGT TCGCGGGCGA ACAAGCGTCT CCGCTGTGGC AGCGCATCCC CGAACAGGTT CTCTACATCG GCGCGGCACT GTGGGCCACG CGCGGCATGT CGCCGCTGCA ATCAAGGGGC GTGCGGTGGC GTCCCCTGAG GTTGAGCGAG CGCTAG
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Protein sequence | MATPVLLVAL AVLRGLGALG VRRFVTWPSA AAHALAIMLF MTATAHFVPG GVTVMPTHDD LVAMVPPLVP LPSLVVHLTG VLEILGALGL ILSRTRRAAG YCLVLLFVVL LPGNIYAATA EVPFAGEQAS PLWQRIPEQV LYIGAALWAT RGMSPLQSRG VRWRPLRLSE R
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