Gene Strop_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4341 
Symbol 
ID5060826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4918851 
End bp4919366 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content67% 
IMG OID640476603 
Producthypothetical protein 
Protein accessionYP_001161147 
Protein GI145596850 
COG category[S] Function unknown 
COG ID[COG4270] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.440484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC CCGTTCTCCT TGTCGCGCTG GCCGTCCTAC GCGGCCTTGG GGCGCTGGGC 
GTGCGCCGAT TCGTGACCTG GCCTTCGGCC GCCGCGCACG CCCTGGCGAT CATGCTGTTC
ATGACCGCCA CAGCCCACTT CGTGCCGGGC GGCGTCACCG TCATGCCGAC CCACGACGAT
CTGGTGGCGA TGGTGCCGCC TCTGGTGCCG CTTCCATCCC TGGTGGTACA CCTCACCGGT
GTGCTCGAAA TCCTCGGCGC ACTCGGCCTC ATACTCTCCC GCACTCGCCG GGCTGCCGGA
TACTGCCTCG TGTTGCTGTT CGTCGTTCTG CTTCCTGGGA ACATCTACGC CGCCACTGCT
GAGGTCCCGT TCGCGGGCGA ACAAGCGTCT CCGCTGTGGC AGCGCATCCC CGAACAGGTT
CTCTACATCG GCGCGGCACT GTGGGCCACG CGCGGCATGT CGCCGCTGCA ATCAAGGGGC
GTGCGGTGGC GTCCCCTGAG GTTGAGCGAG CGCTAG
 
Protein sequence
MATPVLLVAL AVLRGLGALG VRRFVTWPSA AAHALAIMLF MTATAHFVPG GVTVMPTHDD 
LVAMVPPLVP LPSLVVHLTG VLEILGALGL ILSRTRRAAG YCLVLLFVVL LPGNIYAATA
EVPFAGEQAS PLWQRIPEQV LYIGAALWAT RGMSPLQSRG VRWRPLRLSE R