Gene Strop_4321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4321 
Symbol 
ID5060806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4894138 
End bp4894824 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content75% 
IMG OID640476583 
Producthypothetical protein 
Protein accessionYP_001161127 
Protein GI145596830 
COG category[S] Function unknown 
COG ID[COG1865] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.080776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAACG AGCCGTCACT GTGCACCCGT CGCGAGGACG GGCGGAACCT CCCGGCGCTG 
GTCTGGCAGG CCGAACGGCC GTTACTCAGC GCGAGCTCAG CGCCGTTCGG CGGCGGGTTG
GGCGTACGGG GCTGGGTGGT CAACGCGACC GTCCCGATGT CGTACGACCG GGACGACCCC
GTCGAGCACC TGGCCGAACT GGCCGAGCGG TTCGGTCTCG ACGGCCCCGG AATGGGCCTG
TTGACCGGAG TGAACGTCGC GAAGGTGGTG GACCGCACCG ACACCGGAGT ACGGGTCTGG
GCAACCGTCG GGCTCGGCGT TCCGATCTGG GCCGCGGCCC CACCAGAGCG CATCCCGGCC
GAGACCGCGT CCACCGGCGG CGGCCACCCG GTCGGCACCG TCAACACCGT GGTGTACGTG
CCGGCCCGGC TTGGCCCCGC CGCCCTGATC AACGCCGTGG CGACCGCCAC CGAGGCGAAG
GCCCAGGCCA TCGCCGAACT GGGCATGCCC GGCACCGGCA CCCCCACCGA CGCGGTCGTC
GTCTGCTGCC CGACCGAGGG GCCCGAGGCG CCCTACGGTG GCCCCCGCTC CACCTGGGGC
GCACCGCTGG CCCGGGCGGT GCACCGTGCG GTCCTGGCCG GTGGCGCCCG CCCGGTGCCG
CCGGGGTCGC AGCGGCCGGG CGGTTGA
 
Protein sequence
MLNEPSLCTR REDGRNLPAL VWQAERPLLS ASSAPFGGGL GVRGWVVNAT VPMSYDRDDP 
VEHLAELAER FGLDGPGMGL LTGVNVAKVV DRTDTGVRVW ATVGLGVPIW AAAPPERIPA
ETASTGGGHP VGTVNTVVYV PARLGPAALI NAVATATEAK AQAIAELGMP GTGTPTDAVV
VCCPTEGPEA PYGGPRSTWG APLARAVHRA VLAGGARPVP PGSQRPGG