Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4321 |
Symbol | |
ID | 5060806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4894138 |
End bp | 4894824 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640476583 |
Product | hypothetical protein |
Protein accession | YP_001161127 |
Protein GI | 145596830 |
COG category | [S] Function unknown |
COG ID | [COG1865] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.080776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGAACG AGCCGTCACT GTGCACCCGT CGCGAGGACG GGCGGAACCT CCCGGCGCTG GTCTGGCAGG CCGAACGGCC GTTACTCAGC GCGAGCTCAG CGCCGTTCGG CGGCGGGTTG GGCGTACGGG GCTGGGTGGT CAACGCGACC GTCCCGATGT CGTACGACCG GGACGACCCC GTCGAGCACC TGGCCGAACT GGCCGAGCGG TTCGGTCTCG ACGGCCCCGG AATGGGCCTG TTGACCGGAG TGAACGTCGC GAAGGTGGTG GACCGCACCG ACACCGGAGT ACGGGTCTGG GCAACCGTCG GGCTCGGCGT TCCGATCTGG GCCGCGGCCC CACCAGAGCG CATCCCGGCC GAGACCGCGT CCACCGGCGG CGGCCACCCG GTCGGCACCG TCAACACCGT GGTGTACGTG CCGGCCCGGC TTGGCCCCGC CGCCCTGATC AACGCCGTGG CGACCGCCAC CGAGGCGAAG GCCCAGGCCA TCGCCGAACT GGGCATGCCC GGCACCGGCA CCCCCACCGA CGCGGTCGTC GTCTGCTGCC CGACCGAGGG GCCCGAGGCG CCCTACGGTG GCCCCCGCTC CACCTGGGGC GCACCGCTGG CCCGGGCGGT GCACCGTGCG GTCCTGGCCG GTGGCGCCCG CCCGGTGCCG CCGGGGTCGC AGCGGCCGGG CGGTTGA
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Protein sequence | MLNEPSLCTR REDGRNLPAL VWQAERPLLS ASSAPFGGGL GVRGWVVNAT VPMSYDRDDP VEHLAELAER FGLDGPGMGL LTGVNVAKVV DRTDTGVRVW ATVGLGVPIW AAAPPERIPA ETASTGGGHP VGTVNTVVYV PARLGPAALI NAVATATEAK AQAIAELGMP GTGTPTDAVV VCCPTEGPEA PYGGPRSTWG APLARAVHRA VLAGGARPVP PGSQRPGG
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