Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4229 |
Symbol | |
ID | 5060714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4795727 |
End bp | 4796446 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640476491 |
Product | hypothetical protein |
Protein accession | YP_001161035 |
Protein GI | 145596738 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.713657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG AATCAGCCCG GCCCGAGGTG ACCTCGCGGC TCGTCCGGAT CGTCGGCTCA CCGTGGCCGA GGCTGGCATT CTTGGTGGTT CTGCTGACTG GCGCGGCGAC GCTGCTGGCC ACCCAGGGCA CCCCGGACGT GGAGACGCTA CGCGACCGTG TCGCCGCTAC CGGGGCGTGG GCGCCGCTGC TGTACATCGC CGGGTACGCC CTGGGCACCG TGCTGCTGGT GCCCGGGGTA CTGCTCACCG CCGCCGCCGG GGCGCTGTTC GGGGTGGTCG GCGGCTCGGT GGTGGTGCTG GTCGGGGCGA CCACGGGGGC GGTGGCCTCG TTCCTGCTCG GCCGGCTGCT GGGCCGCCCG GCCGTCGAAC GGCTCGTCGG CGGCCGGCTG TACCGCCTGG ACCAGTTCCT GGCGCGACGG GGGCTGATCG CGGTGATCGG GCTGCGGCTC GTGCCGCTGG TCCCGTTCGC GCTGCTCAAC TACGGCTCCG GGGTGACCGC CGTACGGCTG CGCGACTACG CCCTCGGCTC GGCGATCGGC ATGACGCCCG GAATCGTCGC CTACACCGCG GTCGGTGGGT CGCTGACCGA TCCCACCTCG CCGCAGTTCC TCGTCGCCGT GGCAGCTCTG GCCGCGCTGA CCCTGGCCGG CGCGGTGGCG GCACGCCGGG CCCGCCGACG GGAGTCCCGC GCGGTACCGA CCGTCGAGGT CACCAGCTGA
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Protein sequence | MTDESARPEV TSRLVRIVGS PWPRLAFLVV LLTGAATLLA TQGTPDVETL RDRVAATGAW APLLYIAGYA LGTVLLVPGV LLTAAAGALF GVVGGSVVVL VGATTGAVAS FLLGRLLGRP AVERLVGGRL YRLDQFLARR GLIAVIGLRL VPLVPFALLN YGSGVTAVRL RDYALGSAIG MTPGIVAYTA VGGSLTDPTS PQFLVAVAAL AALTLAGAVA ARRARRRESR AVPTVEVTS
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