Gene Strop_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4229 
Symbol 
ID5060714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4795727 
End bp4796446 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content74% 
IMG OID640476491 
Producthypothetical protein 
Protein accessionYP_001161035 
Protein GI145596738 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.713657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG AATCAGCCCG GCCCGAGGTG ACCTCGCGGC TCGTCCGGAT CGTCGGCTCA 
CCGTGGCCGA GGCTGGCATT CTTGGTGGTT CTGCTGACTG GCGCGGCGAC GCTGCTGGCC
ACCCAGGGCA CCCCGGACGT GGAGACGCTA CGCGACCGTG TCGCCGCTAC CGGGGCGTGG
GCGCCGCTGC TGTACATCGC CGGGTACGCC CTGGGCACCG TGCTGCTGGT GCCCGGGGTA
CTGCTCACCG CCGCCGCCGG GGCGCTGTTC GGGGTGGTCG GCGGCTCGGT GGTGGTGCTG
GTCGGGGCGA CCACGGGGGC GGTGGCCTCG TTCCTGCTCG GCCGGCTGCT GGGCCGCCCG
GCCGTCGAAC GGCTCGTCGG CGGCCGGCTG TACCGCCTGG ACCAGTTCCT GGCGCGACGG
GGGCTGATCG CGGTGATCGG GCTGCGGCTC GTGCCGCTGG TCCCGTTCGC GCTGCTCAAC
TACGGCTCCG GGGTGACCGC CGTACGGCTG CGCGACTACG CCCTCGGCTC GGCGATCGGC
ATGACGCCCG GAATCGTCGC CTACACCGCG GTCGGTGGGT CGCTGACCGA TCCCACCTCG
CCGCAGTTCC TCGTCGCCGT GGCAGCTCTG GCCGCGCTGA CCCTGGCCGG CGCGGTGGCG
GCACGCCGGG CCCGCCGACG GGAGTCCCGC GCGGTACCGA CCGTCGAGGT CACCAGCTGA
 
Protein sequence
MTDESARPEV TSRLVRIVGS PWPRLAFLVV LLTGAATLLA TQGTPDVETL RDRVAATGAW 
APLLYIAGYA LGTVLLVPGV LLTAAAGALF GVVGGSVVVL VGATTGAVAS FLLGRLLGRP
AVERLVGGRL YRLDQFLARR GLIAVIGLRL VPLVPFALLN YGSGVTAVRL RDYALGSAIG
MTPGIVAYTA VGGSLTDPTS PQFLVAVAAL AALTLAGAVA ARRARRRESR AVPTVEVTS