| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4226 |
|---|
| Symbol | |
|---|
| ID | 5060711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4792558 |
|---|
| End bp | 4793520 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640476488 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001161032 |
|---|
| Protein GI | 145596735 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAAC CCCCGCGCGG CAGCGCCGGC CTCATGCTGG CGGTGCTCTC GGCACTGACC
TTCGCGACCT CCGGGACGTT CGCCCGCTCG TTGATCGACG CCGGCTGGTC CGCCGGGGCG
GCGGTGGTCG TCCGGGTCGG CCTCGCCGCC CTGGTGTTGA TGGTGCCAGC GGTGCTGGCC
CTGCGCGGTC GCTGGTCGAC GCTCCGGGAC AACGCCACTT CGATCGGTGC GTTCGGGCTG
CTCGGCGTCG TCCTCGCCCA GGTGTGCTTC TTCAACGCCG TGCGCTACTT GCCGGTCGGC
GTCGCGCTGA TGTTGGAGTA CCTGGCCGTC GTGGTGGTGG TCGGTTGGAT GTGGCTGGCA
CACGGGCAAC GACCCCGCCG GCTCACGGTC GTCGGTTCGA TCGTCGCCCT GGCCGGGCTC
GGCCTTGTGC TCGACCTCGC CGGCGCCGGG CGTCTTGACC CGGTGGGTGT GCTCTGGGGG
CTCGGGGCGG CCGTCGGGCT GGCCGGCTAC TTCGTGCTCG CCGGTCGGAT CGACGCGAAC
CTTCCCTCGG TGGTGCTGGC CTCCGGCGGG ATGGCGGTCG GTGCCGGTGC GCTGCTCCTC
CTCGGGCTGG TCGGGGCGTT GCCGCTGCGG GCATACACCG GCACGGTCGA CTTCGCCGGA
CAGCGCACCA GCTGGCTTGT GCCGGTCGCG GGGCTGGTGC TGGTGGCGGC CGTGCTCGCG
TACCTCACCG GGGTCGCCTC GACCCGTCTC CTCGGTGCCC GGTTGGCCTC CTTCGTCGGG
CTGACCGAGG TGATGTTCGC CGTGCTCATC GCCTGGCTGG TGCTGAATGA ACTGCCCACA
GTGATCCAGC TGTCCGGCGG GATTCTGATC GTCGCTGGGG TGGCCCTGGT CCGCCTCGAC
GAGCCACGAG AGACCCCAAC GGTGGAGCCG GGCCAGCAAC CGGCGCTTGC CACCAGCCGA
TAG
|
|---|
| Protein sequence | MRQPPRGSAG LMLAVLSALT FATSGTFARS LIDAGWSAGA AVVVRVGLAA LVLMVPAVLA
LRGRWSTLRD NATSIGAFGL LGVVLAQVCF FNAVRYLPVG VALMLEYLAV VVVVGWMWLA
HGQRPRRLTV VGSIVALAGL GLVLDLAGAG RLDPVGVLWG LGAAVGLAGY FVLAGRIDAN
LPSVVLASGG MAVGAGALLL LGLVGALPLR AYTGTVDFAG QRTSWLVPVA GLVLVAAVLA
YLTGVASTRL LGARLASFVG LTEVMFAVLI AWLVLNELPT VIQLSGGILI VAGVALVRLD
EPRETPTVEP GQQPALATSR
|
|---|
| |