| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4206 |
|---|
| Symbol | |
|---|
| ID | 5060690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4772896 |
|---|
| End bp | 4773552 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640476467 |
|---|
| Product | peptidase C60, sortase A and B |
|---|
| Protein accession | YP_001161012 |
|---|
| Protein GI | 145596715 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.759379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTGC GCAACCGCGG GGCGCTGGCG GCGGTGGCCG CCGGCGCCGC CGCCCTCGCC
GTCGCCGCGC TGGTCGCCTA CACCTTCCGG CCCGCGGCGG ACGTCGGCGC GGATGAGGTG
GCTGCCCTCG CCAGTACCTC TCCCTCCACT GCTGGCAGCC GATCGCAGGT GCCGGTGAAC
ACGGGTGACC TGCCGACCGG CACGGAGGTT GTTCCGCCGG TCGGCCTGCG GATTCCGACG
ATCGGAGTGA CCGCCACCGT GAACGCCGTC GGCATCAACC CACAGACCAG TGAGTTCGAA
GTGCCGCCGA GCGTCGACCA GGTCGGCTGG TACCGCTACG GCCCGGGGCT GGAGGCGCCG
GCGGGCTCCG TGGTGATCGC CGGTCACGTC GACAGCTCCA CTCAGGGCGA AGGCGCGTTC
TTCCGGCTCA AGGAGTTGGA CCAGGGCGAC ACGCTGACGG TGACCGGCAG CGACGGCCAG
GAACGCGACT ACCGCGTGAT CGCCCGGGAG GAGTACCAGA AGACCACAAT TCCGCTGGAC
CGGTACTTCG CCCGTGACGG CGACCAACGC CTGACCCTCA TAACCTGCGG CGGGCCATTC
GACGCCGATG CCCGCCGGTA TCGCGACAAC CTCGTGGTCA CCGCGGTACC GGCATAA
|
|---|
| Protein sequence | MTVRNRGALA AVAAGAAALA VAALVAYTFR PAADVGADEV AALASTSPST AGSRSQVPVN
TGDLPTGTEV VPPVGLRIPT IGVTATVNAV GINPQTSEFE VPPSVDQVGW YRYGPGLEAP
AGSVVIAGHV DSSTQGEGAF FRLKELDQGD TLTVTGSDGQ ERDYRVIARE EYQKTTIPLD
RYFARDGDQR LTLITCGGPF DADARRYRDN LVVTAVPA
|
|---|
| |