Gene Strop_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4205 
Symbol 
ID5060689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4772069 
End bp4772899 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content71% 
IMG OID640476466 
Producthypothetical protein 
Protein accessionYP_001161011 
Protein GI145596714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.548465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCT CATACTTTCG CCGGGTCGCC GCGGGCGGCG CGGTCGCCGC GCTGACGTTC 
GTCGGAGTCG GCGCACTCAC CGCGACCCCG GCTTACGCGG CGACGGCCGA TGTCTCGGTG
GTCCACGGCA TCCCGGACAC CCCGGTTGAC GTGTACGTCA ATGGGGAGAA GACGCTGGAC
AACTTCGCTC CCGGTGAGGT AGCGGGCCCG CTGGAACTGA AGGAGGGCGC GTACGACATC
GCCCTGACCA AGCCGGGTGA GCCGGTGGAC AGCGCGATCC TCACGGTCGA TGACGCCCAG
GTTCCGGGCG GAGCCAACAT CAGCATCGCC GCCCACCTGG ACGCCAGCGG CCAGCCGAAG
ATCACGCCGT TCGTCAACGA CACGTCGAAG GTGGAGGCCG GCAAGTCCCG GCTGATCGTC
CGGCACACCG CCGCCGCTCC GGCGGTGGAC GTACGGGCCG GCGGCACTCC GGTCTTCACG
GAGCTGACGA ACCCGAACGA GGCCAAGGCG GATGTGGACG CGGGCAGCGT CAGCGCTGAC
GTCGTGCTCG CCGGCACCGA GACCGTCGCG ATCGGCCCGG CGGACCTGGA CCTGAGCGAG
GGCACCGCGA CGATCGTCTA CGCGATCGGC TCGGCCGACG CGAGCAACCT CGAGGTCGTG
GCGCAGACGA TCACCGGCCT GCACTCGGCT CCGGCGGGGG TCCCCAGCGG CAACGGCGGC
CAGGCCGACA CGGGCACGAG CACCTGGCTG TACCTGCTGG CCGGCACCGG TGCCCTCCTG
CTGGTCGGCG GGGGTGCTCG GGTCGCGATC GCCCGGAGGA CCAGCCGGTG A
 
Protein sequence
MQLSYFRRVA AGGAVAALTF VGVGALTATP AYAATADVSV VHGIPDTPVD VYVNGEKTLD 
NFAPGEVAGP LELKEGAYDI ALTKPGEPVD SAILTVDDAQ VPGGANISIA AHLDASGQPK
ITPFVNDTSK VEAGKSRLIV RHTAAAPAVD VRAGGTPVFT ELTNPNEAKA DVDAGSVSAD
VVLAGTETVA IGPADLDLSE GTATIVYAIG SADASNLEVV AQTITGLHSA PAGVPSGNGG
QADTGTSTWL YLLAGTGALL LVGGGARVAI ARRTSR