| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4202 |
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| Symbol | |
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| ID | 5060686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4768747 |
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| End bp | 4770150 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476463 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001161008 |
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| Protein GI | 145596711 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.549997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.598984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAA GCCGCCCGCG CCAGAACACC CTGCCTGACT CGCTGACCTT CACCGAACTC
GGTGTGCCCG ACCTGCTCAA CCGTCAACTG GCCGCAGCCG GGGTGGAACG GCCGTTCCCG
ATTCAGGCCG CGACCCTGCC GGACGCGCTC GCCGGGCGCG ACGTGCTCGG CCGGGGCCGT
ACCGGTTCGG GTAAGACCTA TGCCTTCGTG CTGGCGGTGC TGACCCGCCT GACCGCGACC
GCCACGTCCC GTCGGCCCAA GCGCCCCCGG GCGCTGATCC TCGCGCCGAC TCGCGAGTTG
GCCACGCAGA TTGACAGCGT GATGGCGCCG CTGGCCCAGG CGCTGTCGCT TCGCACGATG
GCGATCTTCG GCGGCGTCGC CGCCCGGCCC CAGATCGCCG GGCTTCAGGC CGGGGTCGAT
GTCCTGGTGG CCTGTCCGGG ACGGTTGACC GACCACGTCG AGGCCGGACA CGCGCACCTG
GACGCCGTCG AGATCACGGT CCTCGACGAG GCCGACCACA TGGCCGACCT TGGCTTCCTG
CCCAGCGTCC GGCGGCTGTT GGAACGGACC CCGCGTGGTG GGCAGCGGCT GTTGTTCTCC
GCGACCCTGG ACTCCGGCGT CGACGTCCTG GTGCGGCGGT TCCTCACCAA GCCAGTCGTG
CACAGCGTTG ACTCGACTCT GTCGCCGGTC ACCGCGATGA CGCACCACGT GCTGCACGTC
CACGCCGAGG ACCGGTTCGC CGTGCTGGTC GAGCTGACCG CCACGCCGAG CCGAACCGTG
GTGTTCACCC GCACCAAACG GGGTGCGAAG ACCCTGACCC GACGGCTGGC CGCCGCCGGG
GTCAGCGCGG TCGAGCTGCA TGGCAACCTG GCCCAGGGCG CCCGCACCCG GAATCTGCGG
GCATTCGCCG CCGGGGAGGC GCACACACTG GTCGCCACCG ACATCGCCGC CCGGGGCATC
CACATCGACG ACGTGGCGCT GGTCGTACAC GCCGATCCGC CGGTGGAGCA CAAGGCGTAC
CTGCACCGCT CGGGCCGTAC CGCTCGGGCC GGTGCGGACG GCACCGTCGT GACCCTGATG
ACCGACGCGC AGGTGGCCGA GGTGCGGGCA CTGACCCGCA AGGCCGGCAT CACCGCGACC
ACGAGCCGGC TGCGCCCGGG TGACGCGCTG CTTCACACGA TCGCCCCGGG TGAACGGAGG
TTTGTCCCCC AGCCCGTAGC AGCCTCCGGT GACTCACGGC AGGAGACACG GCCCGCCCAT
GGTGGTCGGG GGCAGCGTGG TGGCCGGGGG CAGCATGGCG GCAAACCGAC GCCAAGCACC
TCGACACGGT CCGCCCCGAC CCGATCCGGG GCGGCGGCCT TCTCCACCCG GGCCCGTCCG
GGTGCTCGCC GCGGTGGACG CTAG
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| Protein sequence | MAASRPRQNT LPDSLTFTEL GVPDLLNRQL AAAGVERPFP IQAATLPDAL AGRDVLGRGR
TGSGKTYAFV LAVLTRLTAT ATSRRPKRPR ALILAPTREL ATQIDSVMAP LAQALSLRTM
AIFGGVAARP QIAGLQAGVD VLVACPGRLT DHVEAGHAHL DAVEITVLDE ADHMADLGFL
PSVRRLLERT PRGGQRLLFS ATLDSGVDVL VRRFLTKPVV HSVDSTLSPV TAMTHHVLHV
HAEDRFAVLV ELTATPSRTV VFTRTKRGAK TLTRRLAAAG VSAVELHGNL AQGARTRNLR
AFAAGEAHTL VATDIAARGI HIDDVALVVH ADPPVEHKAY LHRSGRTARA GADGTVVTLM
TDAQVAEVRA LTRKAGITAT TSRLRPGDAL LHTIAPGERR FVPQPVAASG DSRQETRPAH
GGRGQRGGRG QHGGKPTPST STRSAPTRSG AAAFSTRARP GARRGGR
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