Gene Strop_4197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4197 
Symbol 
ID5060681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4765019 
End bp4765513 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID640476458 
Producthypothetical protein 
Protein accessionYP_001161003 
Protein GI145596706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.729382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCGG ATCATCAAGG CCGGCAGGAA CTGCCGCCGC TCGACACGCT CGCCGCCCGC 
CTCGAGTACC TGTTCGACAC CATCCGCCCC TCGCAGGAGG AGCTTGGAAG GTCCGAGGAG
CCCGGGCGGA AGTACACAAA CAAGGAAGTC GCCGACAAGA TCAACGGACG GCAGGCGGAG
ACTGGCGTGT CCATCAGCGC CGCCTACGTC GGGGAGCTAC GCCGGGGTGT GGCATGTGAT
CCGCGCACCT CACACGTTCG TGCCCTGGCC CGCGCCTTCG GCGTCCACTC TGGCTACTTC
GTGGATGATG CCGCCGCCGA CCGGGTCCAG GAGCAGATCC GACTCCTCGG CGAGCTGCGA
CGGATGGGTG TCAAGCAGGT AGCGCTGCGG CAGGTTCTGG CTGACACTGG CTTGTCCTCG
GCTGACTCTC GGTTGGTGGA ACAGATGGTT GCCCGCCTGC AAGCCCTCGG CGGCAGCCAC
CAGAATGGCC ACTGA
 
Protein sequence
MAADHQGRQE LPPLDTLAAR LEYLFDTIRP SQEELGRSEE PGRKYTNKEV ADKINGRQAE 
TGVSISAAYV GELRRGVACD PRTSHVRALA RAFGVHSGYF VDDAAADRVQ EQIRLLGELR
RMGVKQVALR QVLADTGLSS ADSRLVEQMV ARLQALGGSH QNGH