Gene Strop_4171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4171 
Symbol 
ID5060655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4739426 
End bp4740175 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID640476433 
Productcobalt transport protein 
Protein accessionYP_001160978 
Protein GI145596681 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00476195 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGCGC CGGCCTTGCC TGAGCTTCGG GCCCGCACAC TGGATGCGCA GCGACAGTGG 
GGGGTGGATC CGCGAGTGAA GATTCTCTTG GTGCTGGCCT GCAGCATCGC TGTGATGAGC
CCCGGCGGAC TGCGCTTTGT ACCCGTGGTG CTCATCCTTG CCATCGGTAT GGCAGTGTCG
GAGCGGGCGT GGCCCCGCGC GCTCGGGCTG CCGGCGACCG TGACCGTCAT GTGGGTGTTG
GGTTGGCTGC TCCCGCTATG GTGGCCGAAC GCGTTCACCG CCATCATCGC ACTCGCGTGT
ACCTATCTGA TCCGCTTCGT CGCGACGATC GGCGTCGGAA TGCACCTGGT CGCGACGACC
TCCCCGATGC AGCTCGCCGC CGCGTTCCGG GCCTGGCGCA TCCCGCGCCC CATCACGGTG
ACCCTCGCCG TCATGCTTCG TTTCTTCCCC GTCGTGAGCT CCGAGGCGGC CTCGGTACTG
GACGCTATGC GGCTGCGAGG GCTCGCCGGA ACGAAAGGAC TCCTGCGCCG CCCCGTGCTC
GCCCTCGAGC GATTCACCGT CCCGATGATC GCCGCGAGTC TGCGCGCCAG CGAGGACCTC
TCCGCCTCCG CCATCCTCCG CGGACTCGGC TCCCACCGCA CACCCACCGC CATGCACCCG
CCGCGCTTCG GACCGGCTGA TCTCATCCTT GTCACTATCA GCGCTTTGCT CACCACGGCT
GCCCTGATCC TTCCCTCCCC GCTGGCATGA
 
Protein sequence
MSAPALPELR ARTLDAQRQW GVDPRVKILL VLACSIAVMS PGGLRFVPVV LILAIGMAVS 
ERAWPRALGL PATVTVMWVL GWLLPLWWPN AFTAIIALAC TYLIRFVATI GVGMHLVATT
SPMQLAAAFR AWRIPRPITV TLAVMLRFFP VVSSEAASVL DAMRLRGLAG TKGLLRRPVL
ALERFTVPMI AASLRASEDL SASAILRGLG SHRTPTAMHP PRFGPADLIL VTISALLTTA
ALILPSPLA