| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4152 |
|---|
| Symbol | |
|---|
| ID | 5060636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4726806 |
|---|
| End bp | 4727381 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640476414 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001160959 |
|---|
| Protein GI | 145596662 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACA CTTTCAGCGC GGCTTTGGCC GAAATCGGCC CCCGGCTGAA GCGGGCACGG
GCCCAACGCG GGGTGACCCT GGCCGAACTC GCCGAAGCGA CCGGAATCTC CAAGAGCACA
CTGTCCCGGC TAGAGGCCGG GCAGCGCAAG CCGAGCCTGG AACTGCTGCT GCCCATCGCC
GCGGCCCACC GCATCCCCCT CGATAAACTC GTCGACGTAC CCCAGATCGG CGACCCTCGC
GTGCGCCTGC AGCCGCGCAA GGTCAACGGC CGTACCGTCT TGCCGCTGAC CCAGCACCCC
GGATCCCTGC AAGCCTGGAA GGTGATTATC CCAGTCGACC AGTCGATGCC CGAGCCCAAG
ACCCACGAGG GCTACGAATG GCTCTATGTC CTGGCCGGAA GACTCAGGCT GGTCCTCGGC
GATCATGACA TCGTCCTCGG CACCGGCGAA GCCGCCGAGT TCGACACCCG GCTGCCGCAC
TGGTTCGGCA GCACCGGACA CCACCCGGTG GAGATCCTCA GCATCCTCGG CCGCCAAGGC
GAACGCATGC ACGTGCGTGC CAAGCCGAAG ACCTGA
|
|---|
| Protein sequence | MNDTFSAALA EIGPRLKRAR AQRGVTLAEL AEATGISKST LSRLEAGQRK PSLELLLPIA
AAHRIPLDKL VDVPQIGDPR VRLQPRKVNG RTVLPLTQHP GSLQAWKVII PVDQSMPEPK
THEGYEWLYV LAGRLRLVLG DHDIVLGTGE AAEFDTRLPH WFGSTGHHPV EILSILGRQG
ERMHVRAKPK T
|
|---|
| |