Gene Strop_4147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4147 
Symbol 
ID5060631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4720747 
End bp4721847 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content69% 
IMG OID640476409 
Producthypothetical protein 
Protein accessionYP_001160954 
Protein GI145596657 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.497178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGAAGCGGAT CCTGGTCACC GGGGCAGCCG GCCTGGTCGG CGCCGAGGTC 
TGCGCCCGCC TGCTGAAGGC CGGGCACCGA GTGTCCGGCC TGGTGCACCA CACCCGAGTG
CTGATCGCCA ACAACGGCCG GGCCGTCGCG TCGGCGACGG ACGACAGGGC GGGCACCGTA
CGGCTGGTCA CCGGTGACGT CACCGTTCCA CGGCTGGGCC TCGACGACGA CACCTGGACG
GACCTGGCGA ACGGGCTCGA CCTGATCGTG CATTCTGCTG CGATCACCGA CTTCGGTCAC
CCCCGGGAGG TCTACCAGGC GATCAACACG ACCGGCACGG CTCACGTGCT GGAGCTGGCC
CGCGAGCGAT CCACCCCGCT GGTGCACGTC AGCACCGCCT ACGTGTGCGG CGAACGGGAC
GGCATGATCC TGGAGTCCCA GCTCGACGTC GGGCAGCGGT TCGGCAACCC GTACGAGGAG
AGCAAACTCG CCGCGGAGCA ACTGGTGCGA AAGGCCGCCG CGGAGAGCCT GCCAACCGTG
GTGATCCGGC CCAGTGTCGT CGTCGGCGCC GCCCGCACCG GCGCGGTCCG TGACTTCAAG
AACCTGTACG TCGTGCTGAA GCTCCTGTCC GAGGGTCGGA TCGGCTCGAT CCCGGGCTAC
TTCGACGCCT GCGTCGACCT CGTGCCGGTC GACCATGTGG CGGCGTTGAT CACCGCTGTG
GTTGACGACT TCGACCGGGC CAGGGACCGC ACACTGCACG CCGTGGGATC GTCGGTGCGG
ATGCGCCACA TCTCCGATGT GCTCGCCGAA TACCCATCGT TCCACGTTCC CCGCTACATC
GCCCCGGCCA ACTTCGACCC TGCCATGCTG TCGGACCTCG AACGCGCCTA CTGGCACCGG
GTCATGTCGC TGTACGAGAG CTACTTCCGC CGCCAGCAGC ACTTCGACGA CACCGTCGCG
GCCGGGTTCC GAGGACACAA GCGACTACCC AGCGGGCCGA ACCACCTCCG GCGGATCATC
GACTACGCGG TCAGGGCCGA CTACCTCGGC GCGCCCCTGC CGGGCGTGGC GGAGGCCCTG
AGCCGGGTCA ACCAGCGATG A
 
Protein sequence
MSTPKRILVT GAAGLVGAEV CARLLKAGHR VSGLVHHTRV LIANNGRAVA SATDDRAGTV 
RLVTGDVTVP RLGLDDDTWT DLANGLDLIV HSAAITDFGH PREVYQAINT TGTAHVLELA
RERSTPLVHV STAYVCGERD GMILESQLDV GQRFGNPYEE SKLAAEQLVR KAAAESLPTV
VIRPSVVVGA ARTGAVRDFK NLYVVLKLLS EGRIGSIPGY FDACVDLVPV DHVAALITAV
VDDFDRARDR TLHAVGSSVR MRHISDVLAE YPSFHVPRYI APANFDPAML SDLERAYWHR
VMSLYESYFR RQQHFDDTVA AGFRGHKRLP SGPNHLRRII DYAVRADYLG APLPGVAEAL
SRVNQR