Gene Strop_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4143 
Symbol 
ID5060627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4714478 
End bp4717135 
Gene Length2658 bp 
Protein Length885 aa 
Translation table11 
GC content69% 
IMG OID640476405 
Productphosphoenolpyruvate synthase 
Protein accessionYP_001160950 
Protein GI145596653 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.917793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAACTG TCGCCATTGA AACCGACGTT ACAAAATGGC GAGCTATGGG GGCCAAGGCG 
TCCAATCTGG CGGCGATGAG GAACCTTGGT GTTCATGTTC CGCGCTGGAG CGCAGTTTCC
AGCGATGTCT TCACCGCCTT CCTGGAACGC GTCGAAGGCA TCGACGTGTT GCTGACCCAG
GGCACCGAGG AACCGGAGCG CGTCGCGGCC GAGGTCACCC GACGGATGCG GGCGACCGTG
CTCCCCGACC ACCTCGCCGA CCCGATCCAG GCGGCGTACC AGGCCGCCGG CGGCGGCCGG
GTCGCGGTGC GCTCGTCCGG CCTGGAGGAG GACGGCGACA GGTACTCCTT CGCCGGCCAG
TTCGACACCT TCCTCAACGT CAGCGAGGCC GACGAGGTCC TGGACCGGGT CAAGGACTGC
TGGGCATCGG CCTTCTCAGC GCGCTCGCTG ACCTACCGTC TGCGCAACGG CCTGCCACTG
CGCGCGACCG GCATGGGGGT ACTCATCCAA CAGATGGTGC GCTCGGAGGT CAGCGGCGTG
TTGTTCACCG CCGATCCGGC TACCGGTGCC GGCGACCGGT ACGTGGTCAG CGCTGTCTAC
GGCCTCGGCG AGGGCATCGT CTCCGGCGCT GTCGACGCGG ACACCGCGAC CCTCGAAGCG
GCCACCGGTA CGGTTCTGGC GACCGAGCTC GGCGACAAGT CGGAGCGCTA CGAGCCCGCG
GCCGGCGGCG GCGTCGAAGC CGTCGAGGTA CCGGACGCTG ACCGGGCGCA GCTGTCGCTC
GACCGGGTCG ACCTTGGCAC GTTGTGGGAG GCAGGCCGCG CCATCAGCGA CGCCTTCGGT
GCACCGCAGG ACATCGAGTG GGCGGTCGCG GACGGCCAGC TGTGGATCCT GCAGAGCCGA
CCGATCACCA CCGTGCCGAC CGCGAGCAGG CCGGTGGGTG AGCTACGGAT CTGGGACAAT
TCGAACATCG TGGAGAGCTT CCGGGGAATC ACGTCCCCGC TGACCTTCAC GTTCGCCTCG
ACGGTCTACG GCGCGGTGTA CGAGAGCTAT GCCCGATCCC TGCACGTGCC CGAGAAGCAG
CTCGCGCAGA TGCACGAGTG GTTGCCCGCG CTACTCGGCA GCTTCCACGG TCGCGTCTAC
TACAACCTCA TCAACTGGTA CCGCCTACAG CGGATCGCGC CCTTCTACGA TGTCAACCGC
AAGCTGCTCG AGGTCGCCAT GGGCGTGGAC GAGGCGCTGC CGGACGAGAT CGCCGAAGGG
CTGTACCCGT ACGAGTTCGA CTCGGCCTGG CAACGCCGAC GCGCACGAGT TGTCACCTAC
ACGACCTTCT TCTGGAAGTA CCTGCGCATG GACCGTGACG TCACGCGGTT CGTCGCCTAC
TTCTACGAGC AGTACGCGAT CTTCGACAAG CGCGACTACG CCGCGATGCC CGCCGACGAG
GTGTACCGGG CGTTCCAGGA CCTGATCCGC AGCCTGAACA GGCGGTGGGG TCCGATGCAG
ATGCTCGACT CCACGATTCT GCTGTCGATG GGCATCCTCA CGATGCTCGG CCGGCGGTGG
CTGCCGCACG CCCCCGAGTG GCTGACGTGG GCCGCCGCTC GGCCCGGCGC CGACGTGGAG
TCCGCCGAGC CGGCCCGCGA GTTGGCCGCG CTGGCGGCCA CCGTCAAGGC CGACGACGAG
TTGCGCCACC TGGTGACGGA GACCGACCCG GCGGCGATAC CCGGCGCGCT CGCGGCTGCC
GGGCACACCA CCTTGCTCGC GGCCGTCGAC GCCTACGTGG AGGCGCACGG CTACCGCAGC
CCCGACGAGC TCAAGCTGGA GGTGCCGGAC CTACACGAGG ATCCGTCGAG TCTGTACCTG
ATGCTGCGCG ACGCGCTACA GGCTCCGCCG GAGACAACGA GCGGCGACAG CGCGCAGGAA
TATCTCGACC AGCACCTGCG GGGGCCGCGA CGCTGGATCT ACGAACTGAC CCGCCGCAAG
GTGTCTCGGT CACTGGCGGC GCGCGAGCGG CTGCGGTTCT GCCGGACGAA GGCGTTCGGC
TCGGCCAAGC GGATGCTTCG CGCACTCGGC CGGCACCTGC AGCAGGTCGG GGCGATCGAG
CGGTTCGAGG ACGTGTTCCT GCTGCGCCTC GACGAGCTTG CCGGGGCATA CGAGGGCAAG
ATCGCTCACG ACGAGCTACG CGACATCGTG GCGGCGCGTC GGCGCACGCA GGACCGACAG
GCAACGATGT CCGCCCCACC GCGCTTCCGG ACGTACGGCG CGCCCTACTG GGAGGGCAAT
CTCGAGGCCG CCGGTTGGAG CGTCGGCCGG GCCACCCGCA CCGGCGTCGG TGAACTGCGC
GGGACACCAT CGTCCCCGGG CGTCACGACC GGGCGGGTCG TCGTCACGAC GCGACCTCAG
GACGTCAACG GCGGCATCAT CGTGGCCTAC AGCACCGACC CGGGGTGGGT CGCCGCACTA
CCGTCAGCGA CCGGACTGAT CATCGAGCGG GGAAGCCCGC TGACCCACGT CGCGATCGTG
GCGCGCGAGC TGGGCGTGCC GACGATCGTC AAGGCCAAGG GTGCCACCCA GGAACTGGAG
ACCGGCATGA CCGTCCGGAT GGACGGCGGC ACCGGCACGA TCACGATCCT CAACGACACG
GAGGGGACGT CCGCGTGA
 
Protein sequence
MSTVAIETDV TKWRAMGAKA SNLAAMRNLG VHVPRWSAVS SDVFTAFLER VEGIDVLLTQ 
GTEEPERVAA EVTRRMRATV LPDHLADPIQ AAYQAAGGGR VAVRSSGLEE DGDRYSFAGQ
FDTFLNVSEA DEVLDRVKDC WASAFSARSL TYRLRNGLPL RATGMGVLIQ QMVRSEVSGV
LFTADPATGA GDRYVVSAVY GLGEGIVSGA VDADTATLEA ATGTVLATEL GDKSERYEPA
AGGGVEAVEV PDADRAQLSL DRVDLGTLWE AGRAISDAFG APQDIEWAVA DGQLWILQSR
PITTVPTASR PVGELRIWDN SNIVESFRGI TSPLTFTFAS TVYGAVYESY ARSLHVPEKQ
LAQMHEWLPA LLGSFHGRVY YNLINWYRLQ RIAPFYDVNR KLLEVAMGVD EALPDEIAEG
LYPYEFDSAW QRRRARVVTY TTFFWKYLRM DRDVTRFVAY FYEQYAIFDK RDYAAMPADE
VYRAFQDLIR SLNRRWGPMQ MLDSTILLSM GILTMLGRRW LPHAPEWLTW AAARPGADVE
SAEPARELAA LAATVKADDE LRHLVTETDP AAIPGALAAA GHTTLLAAVD AYVEAHGYRS
PDELKLEVPD LHEDPSSLYL MLRDALQAPP ETTSGDSAQE YLDQHLRGPR RWIYELTRRK
VSRSLAARER LRFCRTKAFG SAKRMLRALG RHLQQVGAIE RFEDVFLLRL DELAGAYEGK
IAHDELRDIV AARRRTQDRQ ATMSAPPRFR TYGAPYWEGN LEAAGWSVGR ATRTGVGELR
GTPSSPGVTT GRVVVTTRPQ DVNGGIIVAY STDPGWVAAL PSATGLIIER GSPLTHVAIV
ARELGVPTIV KAKGATQELE TGMTVRMDGG TGTITILNDT EGTSA