| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4088 |
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| Symbol | |
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| ID | 5060570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4648471 |
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| End bp | 4649856 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476349 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001160896 |
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| Protein GI | 145596599 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.26538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGT CCGCCCCCGA ACTCGTCGAC TTCGCCGCGC TCGGCCTGCC CCAACCCCTG
GTCCGGGAAT TGGCCCGGCA GGGAATCACC ACCCCGTTCG AAATCCAGCG CGCCACCATG
CCCGATGCGC TCGCCGGCCG GGATGTCCTT GGCCGCGGCC AGACCGGCTC CGGAAAGACG
CTGGCGTTCG GGCTCCCCCT GCTCGCCCGG CTGGCCAACG GGGAACGGGC CCGCCCCCGC
CACCCCCGCG CGCTCGTGCT GGTGCCGACC CGAGAGCTGG CAATGCAGGT CAGCGACGCC
CTGTTCCCGC TCGGCCGGAC GATCGGCGTG TTCCTGCGGA CCGCGGTCGG CGGAGTGCCC
TACGACCGGC AGATCAGCTC GCTACGACGC GGCGTCGAGG TGCTGGTGGC CACACCTGGC
CGGCTCGCTG ACCTCATCGA GCGGGGCGTG TGCCGCCTCG ACGACATCGA GGTCACCGTG
CTGGACGAGG CCGACCAGAT GGCTGACATG GGGTTCCTGC CCGAGGTCAC CGAACTTCTG
GCGAAGACCC CCGCCGACGC GCAACGGCTC CTCTTCTCGG CCACTCTGGA CAAAGACGTG
GACGCGCTGG TGCGACGCTT CATGACCGAC CCGGTCACCC ACTCGACCGC GCCACCGACG
GCGGCGGTGG AAACGATGGA TCATCACCTG CTGCTGATCC CGCCGCACGA CAAGTTCTCG
GTCGTCGCGT CGATCGCGGC ACGGGAGGGC CGGACGATGG TCTTCGCCCG GACCCAGCTC
GGCGTGGATC GGCTGGTGGG GCAGCTCGCG GCGGTCGGGG TACGCGCCGG CGGCCTGCAC
GGCGGCAAGA CCCAGCGGAT GCGCACCCGC ACTCTGGCCG AGTTCCGGGA AGGCCGAACG
AATGTCCTGG TCGCCACCGA CGTGGCTGCC CGCGGTATCC ACGTCGACGG CGTCTCGCTG
GTCCTGCACG TTGACCCGCC GAAAGACCCG AAGGACTATC TCCACCGAGC GGGGCGTACC
GCACGGGCCG GCGAGACCGG TGCGGTGGCG ACCCTGGCAC TGCCGAAGCA ACGCCGCGGC
ACCCTCGCCA TGTTGGAGAA GGCGGGGGTG GCCCCGGCAC AAACCCGGGT ACGAGCCGGC
GATCCAGCGC TGGCCGAGCT GACCGGAGCG CGGGAACCGA GCGGCGTACC CGTTCCGGAC
GAGCCCGAAC CACGCCGACG CACCGGCCGG CCAGACGGGG ACCGCCGATT CGCAGACCGG
CACCGCCGCG GCGAACCGGG GCGTACCGGT GATCGCCGCC ACTCGGGCCG GCCGACGGAG
GGCCGGTCGG AGCGGCGGTC GGGAGATCGA CGGTTCGGTG GACGGCCGGC CGCGGGCACC
CACTGA
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| Protein sequence | MPPSAPELVD FAALGLPQPL VRELARQGIT TPFEIQRATM PDALAGRDVL GRGQTGSGKT
LAFGLPLLAR LANGERARPR HPRALVLVPT RELAMQVSDA LFPLGRTIGV FLRTAVGGVP
YDRQISSLRR GVEVLVATPG RLADLIERGV CRLDDIEVTV LDEADQMADM GFLPEVTELL
AKTPADAQRL LFSATLDKDV DALVRRFMTD PVTHSTAPPT AAVETMDHHL LLIPPHDKFS
VVASIAAREG RTMVFARTQL GVDRLVGQLA AVGVRAGGLH GGKTQRMRTR TLAEFREGRT
NVLVATDVAA RGIHVDGVSL VLHVDPPKDP KDYLHRAGRT ARAGETGAVA TLALPKQRRG
TLAMLEKAGV APAQTRVRAG DPALAELTGA REPSGVPVPD EPEPRRRTGR PDGDRRFADR
HRRGEPGRTG DRRHSGRPTE GRSERRSGDR RFGGRPAAGT H
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