| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4085 |
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| Symbol | |
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| ID | 5060567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4644192 |
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| End bp | 4645361 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640476346 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001160893 |
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| Protein GI | 145596596 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.181055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCG GACTCAAGCG CGAGCTCGAA GCGAAGGTGT ACGCCGGCGA GCGGCTGACC
CGCGCGGACG GGATCGCCCT CTACGACAGC GACGACCTGA CCTGGCTGGG GCGGCTCGCG
CACCACCGGC GGTCCGAGCG CAACGGCGAC CGGGTGATGT TCAACGTCAA CCGGCACCTG
AACCTCACCA ACGTCTGCAG CGCCAGCTGT GCGTACTGCT CGTTCCAGCG CAAGCCGGGA
GAGAAGGACG CGTACACGAT GCGGATCGAC GAGGCGGTCC GCAAGGCCAA GGAGATGGAG
GACGAGCAGC TCACCGAGCT GCACATCGTC AACGGGCTGC ACCCCACCCT GCCGTGGCGC
TACTACCCGA AGGTGCTCCG TGAGCTGAAG GCGGCGCTGC CGAACGTACG GCTCAAGGCG
TTCACCGCGA CCGAGGTGCA GTGGTTCGAG AAGATCAGCG GCCTGAGCGC CGACGAGATC
CTGGACGAGC TGATGGACGC CGGCCTGGAG TCGTTGACCG GCGGCGGTGC GGAGATCTTC
GACTGGGATG TGCGGCAGCA CATCGTTGAC CACGCCTGCC ACTGGGAGGA CTGGTCCCGC
ATCCACCGGC TGGCGCACAA CAAGGGCATG AAGACCCCGT CAACCATGCT GTACGGACAC
ATCGAGGAGC CCCGGCACCG TGTTGACCAC GTGCTGCGGC TGCGTGAGTT GCAGGACGAG
ACCAACGGCT TCGTGGTCTT CATCCCGCTG CGCTACCAGC ATGACTTCGT CGACTCGGCG
GACGGCAAGA TCCGTAACCA GATCCAGGCG CGGACGACGA TGGCCTCGCC GGCGGAGTCA
CTGAAGACGT ACGCGGTGTC CCGGCTGCTG TTCGACAACG TCCCGCACGT GAAGTGCTTC
TGGGTGATGC ACGGGCTCTC GGTCGCCCAG ATGTCGCTGA ACTTCGGCGT GGACGACCTG
GATGGCTCGG TGGTGGAATA CAAGATCACC CATGACGCCG ACTCGTACGG CACGCCGAAC
ACCATGCGCC GGGCCGACCT GTTGGACCTG ATCTGGGATG CCGGGTTCCG CCCGGTCGAG
CGCAACACCC GGTACGACGT GGTGCGCGAG TACGACGCCG CGCCCTCGCT CGCCGAGCGT
CGTGCCCAGC CGCAGCAGGT GTGGGCCTGA
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| Protein sequence | MDAGLKRELE AKVYAGERLT RADGIALYDS DDLTWLGRLA HHRRSERNGD RVMFNVNRHL
NLTNVCSASC AYCSFQRKPG EKDAYTMRID EAVRKAKEME DEQLTELHIV NGLHPTLPWR
YYPKVLRELK AALPNVRLKA FTATEVQWFE KISGLSADEI LDELMDAGLE SLTGGGAEIF
DWDVRQHIVD HACHWEDWSR IHRLAHNKGM KTPSTMLYGH IEEPRHRVDH VLRLRELQDE
TNGFVVFIPL RYQHDFVDSA DGKIRNQIQA RTTMASPAES LKTYAVSRLL FDNVPHVKCF
WVMHGLSVAQ MSLNFGVDDL DGSVVEYKIT HDADSYGTPN TMRRADLLDL IWDAGFRPVE
RNTRYDVVRE YDAAPSLAER RAQPQQVWA
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