Gene Strop_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4042 
Symbol 
ID5060524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4594249 
End bp4594998 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content75% 
IMG OID640476303 
Producthypothetical protein 
Protein accessionYP_001160850 
Protein GI145596553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATG ACCCGCTCGC TCCGCTGCTC GCCCTCGCCG ATGTCGCCAC CGCGGTGGAG 
CGGGCCCGCG AGCGCTTCGA CCAGGCGCTG CGGCACCGCG CCCTGCGCCG GCACGGCGGT
CAGGTGGCCG CCGAGGTCAG CCTCCGCTCC GCGGTGGCCA GCGCCGCCCT CGAGGGGCAG
GCCCACGAGC GTGAGGAAGT CCGTGCCGGC ACCGTCACCG AGCCGGTGTT GCAGGGCGCG
CTGCGGGTAG CCGGGGCGCT ACCCGGGCTG ACCGACCTCT GGCCGAAGGC GCCCCGGCAG
GCGCTCGCGA AGCTGCACGT GCTTGCGGCG CGGGAACTCG TGCCGGAGAC AGACCTGGGC
CGCCCGGTGC GCGACGCGGT CGTGGCGGCG CGGCTGGACG GGCTGGCTGC CCTGGTAGCC
GGGGGAAGTC AGGCACCGCC AATGGTCCTC GCCGCAGTCG TCCACGGCGA GCTGTTGAAC
CTGCGGCCCT TCGCCGGCCC GTCCGGGGTG GTCGCCCGCG GTGCCGCCCG GCTGGTGCTG
ATGTCCCGGG GCGTTGACCC GCGGGGCCTG CTCGCCGTGG ACGTCGGCCA TCGGGAACGG
GAGCCGGAGT ACGTCGGTTC GGCTGGAGCG TTCGCCACCG GAACCCCGGA CGGGCTTCGC
TCGTGGCTGC GGCACTACCT GAGCGCCGTC GAGGTGGGCG CCGATCAGCT CACCGGGATT
GGCGATGAGG TGCTCGCGGG GACTCAGTAG
 
Protein sequence
MTDDPLAPLL ALADVATAVE RARERFDQAL RHRALRRHGG QVAAEVSLRS AVASAALEGQ 
AHEREEVRAG TVTEPVLQGA LRVAGALPGL TDLWPKAPRQ ALAKLHVLAA RELVPETDLG
RPVRDAVVAA RLDGLAALVA GGSQAPPMVL AAVVHGELLN LRPFAGPSGV VARGAARLVL
MSRGVDPRGL LAVDVGHRER EPEYVGSAGA FATGTPDGLR SWLRHYLSAV EVGADQLTGI
GDEVLAGTQ