| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4037 |
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| Symbol | |
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| ID | 5060519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4588573 |
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| End bp | 4589334 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476298 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001160845 |
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| Protein GI | 145596548 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC CGGTGCTGAC CGCCGAGCGT TGGTCCCTGC CAGCCCTGCT GGGCAGACTC
GGGTGGAGGA GGCGTCGTCC GATCCGTCGG CTGCGCGACC TTGACCGGGT CCCGCCCGGC
CCTCCGCTGA TCAGGTCGGC GGGTGAGGCT CCGGCGGAGT CCCGTCACCG GCGGGACGCG
ATTCGGCTCG TCGCAGTGCT CGCCGCCGTG GCGATCGCTG TGCTGGTTGG TGGAGTGCCG
GGCCTGCTTG GCGCCCTGCC CGTCGTGGTG TTGCTCGACC GCCTGCTGCG GCGGGTCGAG
TCACCGGCCG CCCGGGAACG GCGCCGACGG GAGAACGCGG CCCTGCCGCT CGCCGCTGAC
CTACTCGCGT CGGCGATGCG CGCCGGTGCC CCGGTTGACC GATCGGTACT GGCGGTGGCA
GAGGCGCTCG ACGGGCCTCT GGCGGAGCGG CTCGCCCGGG TCGGGCGTCT CCTTCGCCTT
GGAGCGGAGC CTGCGGAGGC GTGGTCAACG CTTGCGGCGG TGCCCGGCGC CGAGCGCCTG
GTCGGCGCCG CGCTCCGCTC GGCAACCAGC GGTGCTTCCC TGGCGGGTGC GTTGACACGC
CTCGCCGACG ACCTGCGGGC CGACCGGACC ACGGCGGCCG AGGCGACAGC CCAGCGGTCC
GGGGTTCTGA TCGTGCTGCC GTTGGGGCTC TGCTTCCTAC CGGCCTTCAT TCTCGCCGGC
CTGGTGCCGG TGATCGTCGC CGTTCTCGGC GACGTGCTCT GA
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| Protein sequence | MTPPVLTAER WSLPALLGRL GWRRRRPIRR LRDLDRVPPG PPLIRSAGEA PAESRHRRDA
IRLVAVLAAV AIAVLVGGVP GLLGALPVVV LLDRLLRRVE SPAARERRRR ENAALPLAAD
LLASAMRAGA PVDRSVLAVA EALDGPLAER LARVGRLLRL GAEPAEAWST LAAVPGAERL
VGAALRSATS GASLAGALTR LADDLRADRT TAAEATAQRS GVLIVLPLGL CFLPAFILAG
LVPVIVAVLG DVL
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