Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4023 |
Symbol | |
ID | 5060505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4570962 |
End bp | 4573079 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640476284 |
Product | thymidylate kinase |
Protein accession | YP_001160831 |
Protein GI | 145596534 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGGTG CCGCCTCGTT CGGTGACTGG TTCGGCCTCC TCGCCACCTC TGTCTTCGCC GCCTCCCAGG TGGAGGGGAG CACCGCCAAG GGGGCGGCGT TCGGCACGGT CATCGCGATC CGGCTGCTGC CGGCTCTGGT CCTCGGGCCG ATCGCCGGCG TCTTCGCCGA CCGGTTCGAC CGCCGTTGGA CGATGGTCAT CTGCGACGTG CTGCGGTTCC TGCTGTTCGC CTCGATCCCG CTGGTCGCCG TCCTGGGCGC GAGCGGCGCG GTGGTGGTCG GGTGGGCCAC GATCGCCACG TTCCTGATCG AGTCGATCAC CCTGCTCTGG ATTCCGGCCA AGGAGGCCGC GGTCCCGAAC CTGATCCCTC GGGCCCGGCT CGAAGCGGCC AACCAGCTCA CGCTGATCAC CACGTACGGC CTCACCCCGG TCGTCGCGGC GACCGTCCTC GCCGCGTTGG ACGGCGTGGT CCGGGCAGCC ACCGGTGGGG CCGCCCCGGA CTGGGCCGAG CCGGCCCAGC TCGCGCTCTG GTTCAACGCA CTCTCCCGGC TGGCCACCGC CGTGGTGGTC GCGTTCGGCA TCCGGGAGAT CAGCCAGGGT CCCGCCGCCC AGCGGGGGCA GACCGAGCAG AGCATGCTGC GCCAGTTCAA GGACGGCTGG CGGTTCATCG GCCAGACCCC GCTGGTCCGG GGTTTGGTGC TGGGCATCTT CGGCGCCTTC GCCGGCGGTG GCATCGTGAT CGGCACGGCC CGCTTCTTCG CCAACTCGCT CGGTGCCGGT GACGCCGCCT TCTACCTGCT TTTCGGGGCC ATCTTCATCG GCCTGTCGAT CGGCATCGGG CTCGGCCCGA TGATCGTCAA GGAGATGTCC CGGCGGCGCT GGTTCGGTAT GAGCATCGTG CTGGCCAGCG CGGCGGTGAT GACCCTGGCC TTCGCCATCC ACCTCTCCAT GGCGATGGTG GGCGCGGTCC TGGTCGGCGC GGGCGCCGGC ATGGCCTTCC TCGCCGGCAC CACGCTGCTC GGCGGCGAGA TCGCCGACGA GGTGCGGGGA CGGGTCTTCG CGGTGGTGCA GATCGGTACC CGGCTGGTGC TGATCCTGGC CATCGCGTTG AGCAGCCTAC TCGCCGGGGT TGGTGGCTCC CGACGCTTCG AGGTCGTCAA CCTGGGGATC TCGATCTCGT CGACCCGGCT GCTGCTGCTC GCCGCGGGAC TGGCAGGCAT CTTCGCCGGA GTTAGCGCGT TCAGGCAGAT GGACGACAAG AAGGGCGTTC CCGTCCTGGC CGACCTGTGG GGTTCGGTAC GCGGGCGGCC ACTGACGCCA ACCGAGCCGT TCTCCTCCGC CGGGCTCTTC GTGGTCTTCG AGGGGGGTGA GGGAGCCGGC AAGTCCACCC AGCTCGCCCT GCTCGCCGCA CGGCTGCGGG ACCAGGGGCG GGACGTGGTG GTCACCCGCG AGCCCGGGGC CACCGGAGTC GGCGAGCGAA TCCGGTCCCT GCTGCTCGGC CAGCCGGGCT CCGAGGTGCC CTCCCCGCGC GCCGAGGCGC TGCTCTACGC CGCCGACCGG GCCCACCACG TGGCCACCGT GGTGCGGCCG GCGTTGGCCC GGGGCGCCGT CGTGACGAGT GACCGCTACG TCGACTCGTC CCTGGCCTAC CAGGGTGTGG GGCGGACGCT TCCCGTCGAC GAGGTCTCCT GGCTCTCGTC CTGGGCCACC GGCGGACTCA AGCCCGACCT GGTGGTGCTC CTGGACATTG ATCCGAATAC CGGGCTGTCC CGGGTGGCTG CCCGAGGCGG GGTCTCCGAC CACCTGGAGG CCGAGTCGGT CAGCTTCCAC GAACGGGTCC GGTACGCGTT CCTCGACCTC GCCGCCGCCG ACCCGAGGCG CTACCTGGTG CTGGACGCCG CCCGTCCGAC CGACGAGATC GCTGACGAGG TGGCCCGGCG GGTCGCCGAG CTGCTCGGTG CCCAGGCCGG TGGGCCGAAC CCGCCGGCGG CGAGTGAGTC GACGGCGACC GCACCCGCGG CGAGTAGGCC CAACCCGCCG TCGGCGAGCG GGCCGGACAC CGCGGTTCAC TCCGAGTTAT CCGACCCGAA GCTGGTGACG ATGGAGCGTC GGACCTGA
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Protein sequence | MLGAASFGDW FGLLATSVFA ASQVEGSTAK GAAFGTVIAI RLLPALVLGP IAGVFADRFD RRWTMVICDV LRFLLFASIP LVAVLGASGA VVVGWATIAT FLIESITLLW IPAKEAAVPN LIPRARLEAA NQLTLITTYG LTPVVAATVL AALDGVVRAA TGGAAPDWAE PAQLALWFNA LSRLATAVVV AFGIREISQG PAAQRGQTEQ SMLRQFKDGW RFIGQTPLVR GLVLGIFGAF AGGGIVIGTA RFFANSLGAG DAAFYLLFGA IFIGLSIGIG LGPMIVKEMS RRRWFGMSIV LASAAVMTLA FAIHLSMAMV GAVLVGAGAG MAFLAGTTLL GGEIADEVRG RVFAVVQIGT RLVLILAIAL SSLLAGVGGS RRFEVVNLGI SISSTRLLLL AAGLAGIFAG VSAFRQMDDK KGVPVLADLW GSVRGRPLTP TEPFSSAGLF VVFEGGEGAG KSTQLALLAA RLRDQGRDVV VTREPGATGV GERIRSLLLG QPGSEVPSPR AEALLYAADR AHHVATVVRP ALARGAVVTS DRYVDSSLAY QGVGRTLPVD EVSWLSSWAT GGLKPDLVVL LDIDPNTGLS RVAARGGVSD HLEAESVSFH ERVRYAFLDL AAADPRRYLV LDAARPTDEI ADEVARRVAE LLGAQAGGPN PPAASESTAT APAASRPNPP SASGPDTAVH SELSDPKLVT MERRT
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