Gene Strop_4009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4009 
Symbol 
ID5060490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4559073 
End bp4559927 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content71% 
IMG OID640476269 
Producthypothetical protein 
Protein accessionYP_001160817 
Protein GI145596520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.134143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACAGC CCGTTCTCGC TCTACTGGCG GAAGATCAAC GGCTGGTGCG CCGACGACAC 
CGTGGACATG TCCACTGGTC GCCGGGTGGA GCCGGTTGTC GCCGACTGGT GGGCCACACC
GTCGGCGCCC CGGCAGGCAT GTACGTCCGT CCGGCTGGCC TCTACGCGCA CGAGGCCCGG
CGGTGGCAGC TAGCCACCCC CGATCGGCTC GTCAGGACAT GGGTTCGGCC GGGCGTCGGC
CGGCTGATGT CGGTGCTGGA GTGCAAGTGG ACCGGCGCCT GGGACGGCTG GGGTGAGCCT
GGCACCGATG ACATCCCGGT CTACTACCGC GCACAGGTGC TGTGGCAGTG CGACGTTCTC
GGTGTCGACG AGGGCCACAT AGCCATGCTC GGCCCGGGAG GGTTCCGGGC GTACGGGCCG
ATCCGCCGCG ACGAGCGGGA CCTGACCGTG ATGCGCGACG CGGGTCGTCG GCTCCTCGCC
CGAGTCGACG GCGGTGACCC GCCGCAGGTC GACGAGCACA CTGCCACGCT CGCCACGCTC
AAGCGTCTGC ACCCTGACCT GGTCGACGAG CAGACGGAAG TCAGCACGGA GACGGCCGCG
GGCTACCGGC GGGCCCGCGC CCTCAAGCAG GCCGCTAGCC GGTTGTGTGA CCGGTTCGAG
GCCCGCCTGC GCGCCGAGAT GGGCCCGAAT CGCACCGCGG TCGACGCCGC CGGGGTGAAG
GTCGCCACCC GCTCCGTCTA CGACGTGACC CGCGTCGACA CGGTCCGCCT CAAGGCGGAC
CAGCCGGAGA TGGCCGCCGC GTACGCCACC ACCTCCACTA CCGATCGGAT CACCCCCGCA
AGGAGCAAGC GATGA
 
Protein sequence
MGQPVLALLA EDQRLVRRRH RGHVHWSPGG AGCRRLVGHT VGAPAGMYVR PAGLYAHEAR 
RWQLATPDRL VRTWVRPGVG RLMSVLECKW TGAWDGWGEP GTDDIPVYYR AQVLWQCDVL
GVDEGHIAML GPGGFRAYGP IRRDERDLTV MRDAGRRLLA RVDGGDPPQV DEHTATLATL
KRLHPDLVDE QTEVSTETAA GYRRARALKQ AASRLCDRFE ARLRAEMGPN RTAVDAAGVK
VATRSVYDVT RVDTVRLKAD QPEMAAAYAT TSTTDRITPA RSKR