Gene Strop_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3995 
Symbol 
ID5060476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4546826 
End bp4547503 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID640476255 
Productregulatory protein, TetR 
Protein accessionYP_001160803 
Protein GI145596506 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTA CCAGCCGAAA CCGGACTCAA CAGGTCGAGC AGATCCGCGA GCACGTCCTG 
GGTACGGCCG ACCGGCTCTA CTACCACCGC GGTATCCACG CCGTGGGTAT GGACGTCCTC
CGCGACGAGT CCGGTGTCTC CCTCAGGCGC CTCTACCAGC TGTTCCCCTC CAAGGAGACC
CTCGTCGAAG CCGTCCTGCA CCGCCGTCGT CAGATCTGGA ACACCTGGGT CGACGACGCT
GTCGCCGCCG GAGGGGGCAC GCCCCGCGGA CAACTCCTGG CCATCTACGA CATGCTCGCC
CGCTGGTCCA CCGAAGACGG CTTCCGAGGC TGTATCTTCG TCAACGCCTT CAGCGAACTC
GGCGGCACCA CACCCCACAT CGCCGCCCTC GTCCGCGACC AGAAAGTCCA GTTTCAGCAA
CGCTTGGCCG GCATCGTCGC CGCCACCGGC GCACCCGCAG CCCTCGCCGA CCAACTCGCC
GTCCTCGCCG AAGGGGCACA AACCACCGCC GCCATCACCG GCACCGACAG CCCCGTCCAC
CATGCCCGCA CCGCCGCCAC CACCCTCATC GACACCGCCC TAGGGCCTGA TCCGGTCGGG
CCGGCTGTGC GACACTTCGC CCCCGCCGGG CCCCGTGTCG CCCGGAGACG GCTTGAAGAA
GGTGGGGCAT CAGCGTGA
 
Protein sequence
MPTTSRNRTQ QVEQIREHVL GTADRLYYHR GIHAVGMDVL RDESGVSLRR LYQLFPSKET 
LVEAVLHRRR QIWNTWVDDA VAAGGGTPRG QLLAIYDMLA RWSTEDGFRG CIFVNAFSEL
GGTTPHIAAL VRDQKVQFQQ RLAGIVAATG APAALADQLA VLAEGAQTTA AITGTDSPVH
HARTAATTLI DTALGPDPVG PAVRHFAPAG PRVARRRLEE GGASA