Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3995 |
Symbol | |
ID | 5060476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4546826 |
End bp | 4547503 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640476255 |
Product | regulatory protein, TetR |
Protein accession | YP_001160803 |
Protein GI | 145596506 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTA CCAGCCGAAA CCGGACTCAA CAGGTCGAGC AGATCCGCGA GCACGTCCTG GGTACGGCCG ACCGGCTCTA CTACCACCGC GGTATCCACG CCGTGGGTAT GGACGTCCTC CGCGACGAGT CCGGTGTCTC CCTCAGGCGC CTCTACCAGC TGTTCCCCTC CAAGGAGACC CTCGTCGAAG CCGTCCTGCA CCGCCGTCGT CAGATCTGGA ACACCTGGGT CGACGACGCT GTCGCCGCCG GAGGGGGCAC GCCCCGCGGA CAACTCCTGG CCATCTACGA CATGCTCGCC CGCTGGTCCA CCGAAGACGG CTTCCGAGGC TGTATCTTCG TCAACGCCTT CAGCGAACTC GGCGGCACCA CACCCCACAT CGCCGCCCTC GTCCGCGACC AGAAAGTCCA GTTTCAGCAA CGCTTGGCCG GCATCGTCGC CGCCACCGGC GCACCCGCAG CCCTCGCCGA CCAACTCGCC GTCCTCGCCG AAGGGGCACA AACCACCGCC GCCATCACCG GCACCGACAG CCCCGTCCAC CATGCCCGCA CCGCCGCCAC CACCCTCATC GACACCGCCC TAGGGCCTGA TCCGGTCGGG CCGGCTGTGC GACACTTCGC CCCCGCCGGG CCCCGTGTCG CCCGGAGACG GCTTGAAGAA GGTGGGGCAT CAGCGTGA
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Protein sequence | MPTTSRNRTQ QVEQIREHVL GTADRLYYHR GIHAVGMDVL RDESGVSLRR LYQLFPSKET LVEAVLHRRR QIWNTWVDDA VAAGGGTPRG QLLAIYDMLA RWSTEDGFRG CIFVNAFSEL GGTTPHIAAL VRDQKVQFQQ RLAGIVAATG APAALADQLA VLAEGAQTTA AITGTDSPVH HARTAATTLI DTALGPDPVG PAVRHFAPAG PRVARRRLEE GGASA
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