Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3979 |
Symbol | |
ID | 5060460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4531009 |
End bp | 4531497 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640476239 |
Product | hypothetical protein |
Protein accession | YP_001160787 |
Protein GI | 145596490 |
COG category | [S] Function unknown |
COG ID | [COG4244] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGCC GACTCAAAGT GTTGGGTCAC CCCCTCCACC CAATGCTGGT GATGTTCCCG GTCGCCCTGC TCGCCACCGC CGTGCTCTTC GACGTGGTCG ACACCGTCGG CGGGCCCGAC TTCCTCGGTG AGGTCGCCTA CTGGAACCTC ACCGTCGGCC TGGTCGGTGG CCTGCTGGCC GCGGTGGCCG GGACGTTCGA CCTGCTCGCC ATCCCGACCG GCACCAGAGC CAAGCGGGTG GCGCTCACCC ACGCCGCCGC GAACGTGGCG CTGATCCTGC TCTTCGCCGC GGTCTGGGCG GTCCGGCTCA ACGCCGATAC CCGGGCCGCC GGCGGCGCGC TCATCGCGAT CGAGATCGTC GCCTTGGCCA TCCTCGGGAT CAGCGCGTGG CTCGGCGGAG AACTGGTTGA CCGCCTCGGA GTGGGGGTCG ACCGGGACGC CGACCTGGAC GCGCCCAGCT CCCTGCGGCC CTCGGCAAGC ACCCAGTGA
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Protein sequence | MESRLKVLGH PLHPMLVMFP VALLATAVLF DVVDTVGGPD FLGEVAYWNL TVGLVGGLLA AVAGTFDLLA IPTGTRAKRV ALTHAAANVA LILLFAAVWA VRLNADTRAA GGALIAIEIV ALAILGISAW LGGELVDRLG VGVDRDADLD APSSLRPSAS TQ
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