| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3953 |
|---|
| Symbol | |
|---|
| ID | 5060434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4508631 |
|---|
| End bp | 4508918 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640476213 |
|---|
| Product | regulatory protein GntR, HTH |
|---|
| Protein accession | YP_001160761 |
|---|
| Protein GI | 145596464 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCTCT CTCAGTCGGT GATCAATACT GGAAGAGCCA ACCGACTGCA AGGGGCTTCC
GTGCCGATAC CGCCAACCAT GAACGAGTTG ATCAGTGATC TGTTGAAGCG GATCGAGGTG
GGCGAGCTTC GTCCTGGCTC ACAGATACCG TCCACCCAGG AGCTTTCCGA CCACTACGAC
CTGTCGCTGT CGACGATTCA TCGAGCGGTG GCGCGGCTGC GGGAGCAGGG GGTGTTGGTG
GGTCGTCCGG GGCGTGGTGT CTTCGTCGCC GAGCGACCCC AGCACTGA
|
|---|
| Protein sequence | MLLSQSVINT GRANRLQGAS VPIPPTMNEL ISDLLKRIEV GELRPGSQIP STQELSDHYD
LSLSTIHRAV ARLREQGVLV GRPGRGVFVA ERPQH
|
|---|
| |