Gene Strop_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3940 
Symbol 
ID5060419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4493566 
End bp4493958 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content69% 
IMG OID640476198 
Productdehydratase 
Protein accessionYP_001160748 
Protein GI145596451 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGC CAACCAAGAC TTTCCGGGTA ACGCGGGCGG ACCTGGTCCG CTACGCGGGT 
GCCTCGGGAG ACTTCAACCC GATCCACTGG AGCGACCGGA TCGCCACCTC GGTCGGGCTG
CCCGGCGTGA TCGCCCACGG CATGTTCACG ATGGCGTTGG TGGGCCGGGC CGTCGCCGAG
TGGGCCGGCG CTGCTGACGC GGTGGTCGAC TACGGGGTCC GGTTCACCCG GCCGGTCGTT
GTCCCCGATG ATGAGCAGGG CACCGAGATC GAGGTGACGG CGGCGGTTCG GGAGGTCACC
GATGCGGGCT TGACCAGGAT CGACATCACC GCGACCTGCC GAGGGGAGAA GGTGTTGTCG
CAGGCGAGAG CGACCATCCG GACGCCCGGC TGA
 
Protein sequence
MELPTKTFRV TRADLVRYAG ASGDFNPIHW SDRIATSVGL PGVIAHGMFT MALVGRAVAE 
WAGAADAVVD YGVRFTRPVV VPDDEQGTEI EVTAAVREVT DAGLTRIDIT ATCRGEKVLS
QARATIRTPG