| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3876 |
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| Symbol | |
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| ID | 5060354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4439364 |
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| End bp | 4440542 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476133 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001160684 |
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| Protein GI | 145596387 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.530479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCCCA TCCGCTCCGC AACCGCGGCG CTCACCTCGG CCGTCCTGGC CATCACGCTC
ACCGCCTGCC AGCTCGGCGC GGAGGAGCAG GACACCAACC CGATCATCAT CGCCGCCGAT
CTCGAACTGT CCGGGCCCGG CGCGCCAATG GGCAAGACCT ACCAACGGGC CCTCGAGCTC
AAGGCCGAAC AGCTCAACTC GTCCGGCGCG CTGAACGGAC GGCAGATCGA GCTCCGGGTC
AAGGACAACC GCTCCGACGC AAGCGAGTCG CTCCGCAACA TCAACGACTT CGGCGCTGAC
TCCCAGGTCA GCGCGATCGT CATGGGCGGT TGCAACGAAT GCGCGACGGG CGCGGTGGAC
ACCATCGACG GTCAGCGGGT GCCGATGGTG GCGCTGGCCC CCGCCGAGGC CGTCGCCAGC
CCGGCAACGG AGCGCCGGTA CGTGTTCAAG CTGGCCCCGA ACGCATCGGA CAGCGCCGAA
GCCCTCGCTG TCGAGCTTCG CCGCAACGAG ATCGGTGACG TGGGGGTACT GCGTAGCGAC
GACGCCTACG GCCAAGAAGG GCTCACCGTC CTCCAGGCCG CACTAGACAA GTCCGACATC
GAGGTACTGG GAGTGAAGAC CGTCCGAGCC ACCGACACGG ACGTCTCCAG CCAGATCACC
TCCCTGGTCG ACGACGCGCC CGAGGCACTG GTGCTCTGGA CCCGCGCGGA GCAGGCTGGG
CTCGCCGCCG TCGCCGCACG GGAGGCCGGC TTCGAGGGCG CACTCTACTT CGACGCCTCG
GCCGCGGGCG AGCTCTTCCT CGGCACGACG GCTCAGGCCA CGGAAGACGC CACGATGGTC
TTCACCCAGA CCATGGTGAT CGACGACGTG ATCGCCACCA CCCCGGCGAA GGCGGCACGG
CGACGGTGGT TCCAGGACTA CACCGCCCGC TTCGGCGGCT ACCACGGCTC GTCCTCGTTC
GCCGCGGATG CCCTCCAGCT CCTCGCCGAC GCCGCCCTGC GGTCCGGCAC CGACGCTGGC
AAGCCTGACC GGGAGGGCAT CCGCAATGTG TTGGAGACCT CGCAGATGGA CGGGCTCTCG
GGCCCGATCC GACTGACCCC GGACAACCAC TCCGGCCTCA TGCCACAGGC GCTGACCACT
CTGGTCGCGC GCAACGGTCG CTGGCGCCTG GCCGGGTGA
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| Protein sequence | MSPIRSATAA LTSAVLAITL TACQLGAEEQ DTNPIIIAAD LELSGPGAPM GKTYQRALEL
KAEQLNSSGA LNGRQIELRV KDNRSDASES LRNINDFGAD SQVSAIVMGG CNECATGAVD
TIDGQRVPMV ALAPAEAVAS PATERRYVFK LAPNASDSAE ALAVELRRNE IGDVGVLRSD
DAYGQEGLTV LQAALDKSDI EVLGVKTVRA TDTDVSSQIT SLVDDAPEAL VLWTRAEQAG
LAAVAAREAG FEGALYFDAS AAGELFLGTT AQATEDATMV FTQTMVIDDV IATTPAKAAR
RRWFQDYTAR FGGYHGSSSF AADALQLLAD AALRSGTDAG KPDREGIRNV LETSQMDGLS
GPIRLTPDNH SGLMPQALTT LVARNGRWRL AG
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