Gene Strop_3867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3867 
Symbol 
ID5060345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4426771 
End bp4428918 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content73% 
IMG OID640476124 
Productmolybdopterin oxidoreductase 
Protein accessionYP_001160675 
Protein GI145596378 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.705324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG GTACGCGCCC CGCTACCGCA GCCGGACGAC CCCCGATCGA GGCGGCGACA 
CACTGCCCCT ACTGTGCCCT CCAGTGCGGG ATGACCCTGC GCGAGGCCGA CGGCGAGGTG
GCCGTACTCC CCCGGTGGTT CCCCACCAAC CAGGGCGGGC TCTGCCAGAA GGGCTGGACC
GCCGCCGAGC TGCTGGACCA CCCGGATCGC CTCACCACCG CGCTGCTTCG CGACCCGGCC
AGCGGCGAGC TGCGCCCGGC GAGCTGGGAC GCGGCCCTGG ACCGGATCGT CACGGGCATC
CGCACCATCC AGGCCAGCCA CGGCCGGGAC GCGGTCGCCG TCTTCGGTGG CGGTGGCCTC
ACCAACGAGA AGGCGTACGC GCTGGGCAAG TTCGCCCGGG TGGTGCTCCG GACCCGACAC
ATCGACTACA ACGGGCGGTT CTGCATGTCG TCGGCGGCTG CCGCCGGGAT GCGCGCCTTC
GGCGTCGACC GGGGTCTCCC CTTTCCCCTG GCCGACCTGG GCACCGCCGA CACCCTGCTG
TTGGTCGGCG CGAACCCGGC CGAGACGATG CCCCCACTGG TGCGCTGGCT GACCGAGCAA
CGCCGCCGAG GTGGGCGGCT GATCGTGGTG GACCCACGAG TCACCGCCAC CGCCCGCCAG
GCTGACCTGC ACCTACAGCC GTTGCCCGGC ACCGATCTTG CGGTGGCCAA CGCGCTGCTG
CACATCGCAC TCACCGAAGG GTTCGTTGAC CACAGCTACG TCGCCGGACG CACCACCGGC
TTCGACGAGG TCCGTCGGGC GGTGGCTGAG TGGTGGCCGG CCCGCGCCGA GGCACTGTCC
GGGGTGTCGG TGGCCGATCT GGAGACGACC GCACGTGCGC TGGGCGGTGC CGGCCGGGCG
ATCATCCTCA CCGCCCGCGG CGCGGAGCAA CACGCCAAGG GCGTCGACAC CGTCACCGGG
TACGTGAACC TGGCGCTCGC CCTCGGCCTG CCCGGCCGCC CCGGCTCCGG CTACGGATGC
CTGACCGGGC AGGGCAACGG CCAGGGCGGC CGGGAACACG GCCAAAAGGC CGACCAGCTT
CCCGGCTACC GCCGCATCGA CAACCCCGCT GACCGGGAGC ACGTCGCCAC GGTCTGGGGT
GTGCCAGCGG ACGACCTACC CGGGCCCGGG GTACCCGCGT ACCGGCTGCT GGACTCGCTC
GGCACTCCGG ACGGGCCGAA GGCGCTGCTG GTGTTCGGCT CCAACCCGGT GGTCTCCGCG
CCGCGGGCGG CCCGGATCGA GGGCCGCCTA CGCGACCTCG ACCTGCTGGT GGTCGTCGAC
TTCCTGCGCT CCGAGACGGC GGCCCTCGCC GACGTGGTCC TGCCGACCGC GCAGTGGGCC
GAGGAGGACG GCACCATGAC CAACCTGGAG GGACGGGTCC TGCGCCGGCG TGCGCTACGC
GAACCGCCAC CCGGGGTCCG CACCGACCTG GAGCTCCTCG CCGCCCTCGC CACGGCGCTG
GAGCAGGGCG CAGTGTCCCC TTCCACGGTG GACCGAAAGC CCACAATCCC GCCCGAGCCG
CAGGTGGTGT TCGAGGAGCT CCGAGCGGCC TCGGCCGGCG GGCTCGCCGA CTACGCCGGG
ATCAGCTGGG AACGGATCGA CGCGCGAGCG GGAGCCTTCT GGCCCTGCCC GGATAGTGAC
GGACCGGACA CCCCCCGGCT CTTCGCCGAC CGTTTCCCCA CCCCGGACGG GCGCGCCCGA
TTCCATGCCG TGCAGCACCG ACCCGCCGCG GAGGAGGTGT GCGCCGCCTA CCCGCTGCAC
TTCACCACCG GACGGGTGCT CGCCCAGTAC CAGTCGGGAA CCCAGACCCG ACGGGTGCCC
GCGCTGCGAC AGGCCGCGCC AGCGGCCTTT GTCGAACTGC ATCCGGACGT GGCCGACCGA
CTGGGCGTGG TCGACGGCGA GCTGGTGCGG GTGCTCTCCC GCCGGGGCGA GTTGGTCGCG
CCGGCTCGGC TCAGCCCGAC GATCCGGCCG GACACCGTCT TCGCCCCGTT CCACTGGGGC
GGCGCCGCCC GCGCCAACAC GGTCACCAAC GATGCCGTCG ACCCGATCTC CGGGATGCCG
GAATTCAAGA TCTGCGCGGT ACGAGTGGAG AAGGCGGTGG CGACGTGA
 
Protein sequence
MTDGTRPATA AGRPPIEAAT HCPYCALQCG MTLREADGEV AVLPRWFPTN QGGLCQKGWT 
AAELLDHPDR LTTALLRDPA SGELRPASWD AALDRIVTGI RTIQASHGRD AVAVFGGGGL
TNEKAYALGK FARVVLRTRH IDYNGRFCMS SAAAAGMRAF GVDRGLPFPL ADLGTADTLL
LVGANPAETM PPLVRWLTEQ RRRGGRLIVV DPRVTATARQ ADLHLQPLPG TDLAVANALL
HIALTEGFVD HSYVAGRTTG FDEVRRAVAE WWPARAEALS GVSVADLETT ARALGGAGRA
IILTARGAEQ HAKGVDTVTG YVNLALALGL PGRPGSGYGC LTGQGNGQGG REHGQKADQL
PGYRRIDNPA DREHVATVWG VPADDLPGPG VPAYRLLDSL GTPDGPKALL VFGSNPVVSA
PRAARIEGRL RDLDLLVVVD FLRSETAALA DVVLPTAQWA EEDGTMTNLE GRVLRRRALR
EPPPGVRTDL ELLAALATAL EQGAVSPSTV DRKPTIPPEP QVVFEELRAA SAGGLADYAG
ISWERIDARA GAFWPCPDSD GPDTPRLFAD RFPTPDGRAR FHAVQHRPAA EEVCAAYPLH
FTTGRVLAQY QSGTQTRRVP ALRQAAPAAF VELHPDVADR LGVVDGELVR VLSRRGELVA
PARLSPTIRP DTVFAPFHWG GAARANTVTN DAVDPISGMP EFKICAVRVE KAVAT