Gene Strop_3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3830 
Symbol 
ID5060308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4387922 
End bp4388827 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content73% 
IMG OID640476088 
ProductNUDIX hydrolase 
Protein accessionYP_001160639 
Protein GI145596342 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCAGC GGTGGATAGC GGCATATGGG GTGCTGCGGG ACGACGGCGG GCAGGTGCTA 
CTCGCACGTG GCTCGGGCGG AGGCCCGGAT TGGGATGCCT GGCGGCTGCC GGGCAGCAGG
GTGCGGCACG CCGAGCATCC CGCCACCGCG GTAGTCCGCG GGTTCGCCGA GGAGACCGGG
GTGGCGGTGA CGGTGGCGGG CGTCCGGGCG GTGGTAGCCG ATGTGGCTAC CTTCTCCGCC
GGAGTCGGGG TACACACCGA CCGGCTGGTG TTCGACGTGA CCGCGACGAC GGGTAGAGTG
TTCCGGCCGG AGCAGGGCGG CGGCGACAGG CTGCGGTGGT TCACGCCCGA CTCGGCGGCG
GCGGTACCCG TGATGCCGTT CACGGCGGAT GTGCTCGGCC TGTCGGGCAC GCTCCTGCCG
CCGGGACCGT CCAGCGCGTT GCCGCTGGCG GCGACCGCTC CGGCGCCGAC CGCTCGGCGG
CACCGATTCG GCGCGTACGG GCTGGTCACC GACCCGGCCG GTCGGGTCCT GTTGACGCTG
ATCGCGGAGG GCTACCCAGG CGCTGGCAGC TGGCACCTGC CCGGCGGGGG CACCGACTAC
GGTGAGGCGC CGGAGACGGG GCTGCTCCGC GAGTTGGTGG AGGAGTCCGG CCAGGTCGGT
CGGGTCGTCG AGTTGGTCGG CGTGGACAGC TTCCACAACC CGATGGCGGT CGGGCCGGAG
GGGTATCCGT TGGACTGGCA CACCGTTCGG GCCATCTACA CGGTGGTGGT GGATGAGCCG
ACCGAGGCGC GGGTGCTGGA GCTGGCCGGG GGGTCGACCG CGCGCGCGAG CTGGTTTACC
GTCGCCGAGC TCACGGGGCT TCGGCTCAGT GATATCGCTG CCCGGACGGT CGCCGAGCTC
CGCTGA
 
Protein sequence
MQQRWIAAYG VLRDDGGQVL LARGSGGGPD WDAWRLPGSR VRHAEHPATA VVRGFAEETG 
VAVTVAGVRA VVADVATFSA GVGVHTDRLV FDVTATTGRV FRPEQGGGDR LRWFTPDSAA
AVPVMPFTAD VLGLSGTLLP PGPSSALPLA ATAPAPTARR HRFGAYGLVT DPAGRVLLTL
IAEGYPGAGS WHLPGGGTDY GEAPETGLLR ELVEESGQVG RVVELVGVDS FHNPMAVGPE
GYPLDWHTVR AIYTVVVDEP TEARVLELAG GSTARASWFT VAELTGLRLS DIAARTVAEL
R