| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3821 |
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| Symbol | |
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| ID | 5060299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4377348 |
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| End bp | 4378289 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640476079 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001160630 |
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| Protein GI | 145596333 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0857155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CGACGAGCGC CGGCGCCACC GTCGGCGGTG CCCCGGGTTC CGGCGACGGC
CGGGCCCCGG AGAAGACGAG CACGAGCGGC AAGGAGCGCA ACGCCAGCCT GTGGGCGGAT
GCCCGCCGGC AGTTGGTTCG CGACCCGGTC TTCATGCTCG CCGTGCTGTA CATCGTCGTG
GTCAGCACGA TGGCGGCCTT CCCCACGCTC TGGACCAGTC AGGATCCCCG GGCGTGCAGC
ACCGACCAGT CCCGGGTCTC GCCGAGCTGG GAGCACCCGT TCGGCTTCAA CATCCAGGGC
TGTGACTACT ACTCGCACGC CATCTACGGC GCCCAGCCGT CGATGGTGAT CGCGATCATG
GCTACCGGGG GCATCGTGCT CTTCGGTGGT CTGATGGGGC TCCTCGCCGG GTACTACGGT
GGCTGGGTCG ACGGGATCAT TTCCCGGCTG ATGGACATCT TCTTCTCGCT GCCGTTCCTG
CTCGGTGCGA TCGTCTTCCT GACCGTGATC AAGCAGCAGA ACCCCGTGAC CATCGCCCTG
GTGCTGTTCC TGCTGAGCTG GCCGACGATC GCCCGGATCA TCCGCGGTAG CGTCATCTCC
TCGAAGGATC TGGACTACGT GCAGGCCGCC AAGGCGGTCG GGGCCAGTAA CGGCCGGTTG
ATGTTCCGGC ACATCCTGCC GAACGCGATC GCGCCGATGT TGGTGTACGC CACGATCGTG
CTGGGTTCGT TCGTCGCCGC GGAGGCCACG CTGACCTTCC TCGGGATCGG GCTCCAGCCG
CCGACGCAGT CCTGGGGCAT CATGATCTCG GCCCACCAGG TCTACTTCCT GGAGGATCCG
TGGCTGCTGC TCTTCCCCTG CGGGCTGTTG ATTGGCACGG TGCTGTCCTT CATTCTCATG
GGTGACGCCC TGCGTGACGC CCTCGACCCG AAGTTCCGGT GA
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| Protein sequence | MSDATSAGAT VGGAPGSGDG RAPEKTSTSG KERNASLWAD ARRQLVRDPV FMLAVLYIVV
VSTMAAFPTL WTSQDPRACS TDQSRVSPSW EHPFGFNIQG CDYYSHAIYG AQPSMVIAIM
ATGGIVLFGG LMGLLAGYYG GWVDGIISRL MDIFFSLPFL LGAIVFLTVI KQQNPVTIAL
VLFLLSWPTI ARIIRGSVIS SKDLDYVQAA KAVGASNGRL MFRHILPNAI APMLVYATIV
LGSFVAAEAT LTFLGIGLQP PTQSWGIMIS AHQVYFLEDP WLLLFPCGLL IGTVLSFILM
GDALRDALDP KFR
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