Gene Strop_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3818 
Symbol 
ID5060296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4374889 
End bp4375227 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content71% 
IMG OID640476076 
Productchorismate mutase 
Protein accessionYP_001160627 
Protein GI145596330 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01808] monofunctional chorismate mutase, high GC gram positive type 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAG GCGTGGCGGA GCAGAACGGC AGCACGGACG ACACGAGTGG CGCGGAGGGC 
ACCGTCGATC GCGACGCCGG CACGAAGGAG CCGTTGGCCG TGGCGCAGAT CGCGAATATC
CGGCAACGGA TCGACGAGAT CGACGGAACC CTGATCGACC TCTGGCAGGA GCGGGCACGG
CTCTCCCGGC AGGTTGGCGC GACCCGAATG GCCTCCGGCG GCACCCGCTT GGTGCTCTCT
CGCGAGCAGG AAATCCTGGA ACGCTTCCGG GCCGCGCTGG GCGCGGACGG CACCCAGGTC
GCCCTCCTGC TGCTCCGCGC CGGCCGCGGC CCGCTCTGA
 
Protein sequence
MMTGVAEQNG STDDTSGAEG TVDRDAGTKE PLAVAQIANI RQRIDEIDGT LIDLWQERAR 
LSRQVGATRM ASGGTRLVLS REQEILERFR AALGADGTQV ALLLLRAGRG PL