Gene Strop_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3773 
Symbol 
ID5060251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4323798 
End bp4324616 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID640476031 
Productmethionine aminopeptidase, type I 
Protein accessionYP_001160582 
Protein GI145596285 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.93912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGC TGAAGTCCGC CGAGGAGATC GACCAGATGG CGGTGACCGG CCAGTTCGTC 
GGTGAGTTGC TCGCCGAACT GAGCGAGGTT GCCGCGGTCG GCGTCAACCT GATGGATCTC
GAACACCACG CCCGACGTCG GATCGCGCAA CGCGGCGCCG AGTCCTGCTA CTGGGACTAC
GCTCCCTCGT TCGGCCGCGG CCCCTTCCGC AACGTTCTCT GCCTGTCGGT CAACGACGCG
GTACTGCACG GCCTGCCGCA CGACTATCTC CTCCGCGATG GAGACCTGCT CAGCATCGAC
ATGGCGGTCA GCATCGAGGG TTGGGTTGCC GACTCGGCGC TCTCGCTCAT CGTCGGCACC
CCCGCCCCGG CCGACCTGAA GCTGATCGAG GCCACCGAGG TTGCCCTCGA CGCCGGCATC
GCCGCCGCCC AGCCCGGCGG CCGGCTCGGT GACATCTCCG CCGCGATCGG TCAGGTCGCG
CACTCCTACG GTTACCGGGT CAACGGCGAG TTCGGTGGTC ATGGCATCGG CCGCACTATG
CACGAGGCGC CACACGTGGC CAACAACGCC CGCGCCCGTC GCGGCCTGAA GCTCCATCCC
GGCCTCACCA TCGCCATCGA GCCTTGGTTC TGCGCCTCCA CCGACAAGAT CAAGTTTGAC
GAGGACGGCT GGACGATCCG CTCCGCCGAC GGCTCCCGTA CCGCCCACTC CGAACACTCG
ATCGCCATCA CCGCCACGGG CCCCCAGATC CTGACCCATC GCCCCAGCCG CGGTGCCACC
AGCACCGATC CCACCAGCAG GCCCACGACG ACCTCATGA
 
Protein sequence
MIELKSAEEI DQMAVTGQFV GELLAELSEV AAVGVNLMDL EHHARRRIAQ RGAESCYWDY 
APSFGRGPFR NVLCLSVNDA VLHGLPHDYL LRDGDLLSID MAVSIEGWVA DSALSLIVGT
PAPADLKLIE ATEVALDAGI AAAQPGGRLG DISAAIGQVA HSYGYRVNGE FGGHGIGRTM
HEAPHVANNA RARRGLKLHP GLTIAIEPWF CASTDKIKFD EDGWTIRSAD GSRTAHSEHS
IAITATGPQI LTHRPSRGAT STDPTSRPTT TS