Gene Strop_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3770 
Symbol 
ID5060248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand- 
Start bp4322380 
End bp4322982 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content68% 
IMG OID640476028 
ProductNUDIX hydrolase 
Protein accessionYP_001160579 
Protein GI145596282 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.288059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGTCTT GTGGCCTGAT CGTCGCTTTC CCGTGCCTTT TTGGTGGTCT TAGTCTGTCC 
CTCCGTAGGA ACTGTGTCCA CGGCCACACT TCTGGGTCTT CCTGGCCTGA TGGGTCGGCC 
ACGGTACCCA AACCGCCGAT TGATCTGGCA CGCTGGACGC TCGTGCGGAC CGAACAGGCA 
AGCGATGGCG GCCGGGTCGA GCGACCCGAG CCGAAGGTGA TCGTCGGCGC GGCAATCATC 
CGGAACGGTC GGGTGTTGGC CTGCGCGCGG TCTGCCCCGC CGGAGGTGGC GGGCAAGTGG 
GAGTTCCCCG GTGGCAAGGT GGAGCCGGGG GAGAGCGAGA CCGCGGCGCT CCTGCGTGAG 
TGCGCTGAGG AGTTGGCCGT CCGGGTGGAG ATCGGTGACC GGGTCGGCCG GAGTGTTCGG 
ATGGCCCACG GGCGCTCGGT GCTGAAGGTG TATCTGGCCC GGCTGCTGCA CGGTGACCGG 
CCGCAGGCAT TGGAGCACTC GGCGCTGCGT TGGCTCTCCG CGGCCGAGTT GGACAGCGTC 
ACCTGGCTAC CCGCCGATGC CCCGATTGTC GCCGCGCTCC GCCCGTTGCT GGCTGCCGAC 
TGA
 
Protein sequence
MLSCGLIVAF PCLFGGLSLS LRRNCVHGHT SGSSWPDGSA TVPKPPIDLA RWTLVRTEQA 
SDGGRVERPE PKVIVGAAII RNGRVLACAR SAPPEVAGKW EFPGGKVEPG ESETAALLRE 
CAEELAVRVE IGDRVGRSVR MAHGRSVLKV YLARLLHGDR PQALEHSALR WLSAAELDSV 
TWLPADAPIV AALRPLLAAD