| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3765 |
|---|
| Symbol | |
|---|
| ID | 5060243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4315355 |
|---|
| End bp | 4316791 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640476023 |
|---|
| Product | peptidase U62, modulator of DNA gyrase |
|---|
| Protein accession | YP_001160574 |
|---|
| Protein GI | 145596277 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.315015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGT TCGATGCCGC GTCCACCGCT GTCCAAGCCG CCCTTGACGC GGGCGCCCGG
TACGCGGATG CCCGCGTGAT GCACCGGCGA TACGAGTCCA TGACGGCCCG CGACGGCGAC
ATCGAGGAGC TGAACCAGGA CGAGAGCGTC GGGCTTGGGG TTCGGGCGCT GGTCGGATCG
AGCTGGGGCT TCCACGCCGT CCCCGACCTG TCCGGTCCCG CCGCCCGCGA CGCCGGCCGA
CGGGCGGCGC GGATCGCCGC GGCCAGTGCC CGCGTCCCGG GCCCGCCCAT CGACCCGATC
CCGGCCGAGC CGGTCACGGC GAGCTGGGCC TCGGCCTACG CGGTGGATCC GCTCGGCGTG
CCGCTGTCGG TCAAGGGCGA CCTGCTGGTC GAGGCGACCC GGCTGATGGC CGAGCACGGC
GCCGACCTCG CCGAGGGCCT CTACCAGATC TGGGACACGA CCAAGTGGTT CGTCTCCAGC
GAGGGCCACC GGATCGACCA GCGCATCCGC GAGTGCGGCG GTGGCATCTC GGCCACCTCG
ATCGGCGCCG GGGAGACCCA ACGCCGGTCG TACCCGAGCT ACCGGGGCCA GTACGGCACC
AGCGGGTGGG AACTGGTCGA CTCGCTCGAC CTGACCGCGC ACGCGGCCCG AGTGGCCGAG
GAGTCCCGGG CACTGCTCAC CGCACCGCCC TGCCCCGCTG GCGAGACCGA CCTGATCCTT
GGCGGCGAGC AACTCGCCCT CCAGATCCAC GAGTCGGTCG GGCACGCCAT CGAACTGGAC
CGGATCCTGG GCTGGGAGGC GGCCTTCGCC GGTACCTCCT GGTTGGAACT GGCCCAGCTC
GGGTCGCTGC GGTACGGCTC GGAGCTGATG ACCATCACCA TCGACCCGAC GATCCCCGGG
GCGCTGGGCA GCTTCGGCTA CGACGACGAG GGTTCCCCGG CGGTCCGCCG GGACGCCGTC
CGGGAGGGGC GCTGGGTGGG CGTGCTCGCA GGCCGTGACT CGGCCGCCGT CGCGGGCCTG
GACTACGGCG GTAGCGTCCG TGCGGACGGC TGGGCCCGGC TGCCGATGGT GCGAATGACC
AATGTCGGGC TGGAGCCCGG TCCACACAGC CTGGACGAGA TCATCGCCGC CACGGACGAG
GGGGTGTTGA TGGACATCAA CCGGTCCTGG TCCATCGACG ACAAGCGGCT CAACTTCCAG
TTCGGCTGCG AGGTCGGCTG GGAGATCAGG AAGGGGAGGC GGGGACGGAT GCTGCGCAAC
CCCACGTACA CCGGGATCAG CCCGCTCTTC TGGCGTTCGA TGGACATGCT CTCCGGCGAG
ACGGTCGCCT GGGGCACGCC CAACTGCGGC AAGGGTCAGC CGGGGCAGGT GGGGCACACC
GGCCATCCGG CCGCACCCGC CCGCTTCCGT GGCATCCGGG TGGGGGTGCA CGCGTGA
|
|---|
| Protein sequence | MTEFDAASTA VQAALDAGAR YADARVMHRR YESMTARDGD IEELNQDESV GLGVRALVGS
SWGFHAVPDL SGPAARDAGR RAARIAAASA RVPGPPIDPI PAEPVTASWA SAYAVDPLGV
PLSVKGDLLV EATRLMAEHG ADLAEGLYQI WDTTKWFVSS EGHRIDQRIR ECGGGISATS
IGAGETQRRS YPSYRGQYGT SGWELVDSLD LTAHAARVAE ESRALLTAPP CPAGETDLIL
GGEQLALQIH ESVGHAIELD RILGWEAAFA GTSWLELAQL GSLRYGSELM TITIDPTIPG
ALGSFGYDDE GSPAVRRDAV REGRWVGVLA GRDSAAVAGL DYGGSVRADG WARLPMVRMT
NVGLEPGPHS LDEIIAATDE GVLMDINRSW SIDDKRLNFQ FGCEVGWEIR KGRRGRMLRN
PTYTGISPLF WRSMDMLSGE TVAWGTPNCG KGQPGQVGHT GHPAAPARFR GIRVGVHA
|
|---|
| |