| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3758 |
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| Symbol | |
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| ID | 5060236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4308600 |
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| End bp | 4309706 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476016 |
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| Product | N-succinyldiaminopimelate aminotransferase |
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| Protein accession | YP_001160567 |
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| Protein GI | 145596270 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGAACCGGC CCACGCCGGT CTCGGCTCGG CTGCCGGAGT TCACCTGGGA CGCCCTGGAC
GCCGCGGCCG CTCTGGCCGC GGCGCACCCG GGGGGCCTGA TCAACCTCTC CATCGGTACG
CCGGTCGACC CGGTGCCGCC GTCGATTCGG CAGGCGCTGG CGGACGCGTC GGACGCTCCC
GGATACCCGC TGACCGCCGG CTCGCCGGCG CTGCGGACCG CGATGGCGGC CTGGGCGGCG
CGGGCCTGCG GTGCCAACCC GGAGGGGCTG GGCGTGCTTC CGGTCGTGGG GTCGAAGGAA
CTGGTCGCCT GGCTACCCAC GCTGCTCGGG ATCGGGCCGC AGGACGTGGT CGTGGTGCCG
TCGGTCGCGT ACCCGACCTA CGAGGACGGG GCTCGGCTCG CCGGGGCGAC CGTCGTACGG
TCTGATTCGT TGACCGCCCT CGGTCCGACC CCCCGGGTCC GCCTGGTCTG GGTGAACTCG
CCGGGGAACC CGACGGGGCG GGTGCTGCCC GCCGCCCACC TGCGCAAGGT GGTCGACTGG
GCCCGTGAGC GCGGTGCGGT CGTCGCCAGT GACGAGTGTT ACCTGCCGTT GGGCTGGGAG
GCCGAGCCGG TCTCGGTGCT GTCGCCACAG GTCTGCGGCG ACTCGTACCG CAGCGTCCTG
GCGGTGCACT CGCTGTCGAA GCGCTCCAAC CTCGCCGGCT ACCGGGCCGG CCTTGTGGCC
GGTGACCCGG TGCTCGTCGC CGAGCTGCTC AAGGTGCGCA AGCACGCTGG CATGATCATG
CCAGCGCCGG TTCAGGCCGC GATGGTGACC GCCCTCCAGG ACGAGCGGGA CGCCACCGAG
CAGCGGGAGC GCTACCGAGC CCGGCGTGCC GTGCTGCGCG CCGCATTCAC CGCCGCCGGA
TTTACCGTCG AGCACTCGGA GGCCGGCCTC TATCTGTGGC TGACCCGGGA CGAGGACTGC
TGGGCCACGG TCGACTGGCT GGCCCGGCGG GGCATCCTGG TAGCGGCGGG TGCCCTCTAC
GGGCCCACCG GCGCTCGGCA CGTCCGGGTG GCGTTGACCG CGTCCGACCA ACACGTGGCG
GCGGTCGCCG ACCGGCTGAC CGGCTGA
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| Protein sequence | MNRPTPVSAR LPEFTWDALD AAAALAAAHP GGLINLSIGT PVDPVPPSIR QALADASDAP
GYPLTAGSPA LRTAMAAWAA RACGANPEGL GVLPVVGSKE LVAWLPTLLG IGPQDVVVVP
SVAYPTYEDG ARLAGATVVR SDSLTALGPT PRVRLVWVNS PGNPTGRVLP AAHLRKVVDW
ARERGAVVAS DECYLPLGWE AEPVSVLSPQ VCGDSYRSVL AVHSLSKRSN LAGYRAGLVA
GDPVLVAELL KVRKHAGMIM PAPVQAAMVT ALQDERDATE QRERYRARRA VLRAAFTAAG
FTVEHSEAGL YLWLTRDEDC WATVDWLARR GILVAAGALY GPTGARHVRV ALTASDQHVA
AVADRLTG
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