Gene Strop_3756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3756 
Symbol 
ID5060234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4306848 
End bp4307486 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID640476014 
Producthypothetical protein 
Protein accessionYP_001160565 
Protein GI145596268 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.919622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.475727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACTG GGCCGGTGGT GGCGGTTCGC GGAGAGTCCT TCCGGGAGGT CGCGCCGGAG 
CAGGCCCGGT TCGCCGTGGC CGTGCTGGCC CGGGACCGGG ATCGGGAGAC CACGCTGAGC
CGGCTGGCCG AGCGGGCCGC GGCCGTCCGG GTGCTCCTCG ACGGGTACGG CCCGATGATT
GAGCGTCGGG AGACCGGCGA GCTGCGCGTC CGACCGGAGC TGCGACGCTC CGGGGAACGG
GTGCGCGCCT ATCACGGCAG CGTGCGCACC ACCGTCACGG TTGCTGACTT CACCACCCTG
GGCGAGCTGA TGCTGCGCCT CGCTGACCAG GACCAGGTCG AGGTGTCGGG GCCGTGGTGG
TCGCTGCGTC CGGACAGCCC GGTCTATCGC GAGGCCCGGC AGGCGGCGAT CGCCGACGCG
TTGCGGCGGG CCCACGAGTA CGCGGAGGCC TTGGGTGCCC AGGTGACCGC GCTGGTCGAG
CTCGCCGACG TGGGCGTCGA TCGGCCACCC ACGTTGGCCG CCATGGCCTA CTCGGCTACG
GCCGAAGGGG CTCCCGAGCT CGATCTGGAT CCGCGATCCC AGTCGGTGCA GGCAGCGGTG
CACGCACGTT TCACGATCAG TGAACCGGTC CTCGGCTGA
 
Protein sequence
MVTGPVVAVR GESFREVAPE QARFAVAVLA RDRDRETTLS RLAERAAAVR VLLDGYGPMI 
ERRETGELRV RPELRRSGER VRAYHGSVRT TVTVADFTTL GELMLRLADQ DQVEVSGPWW
SLRPDSPVYR EARQAAIADA LRRAHEYAEA LGAQVTALVE LADVGVDRPP TLAAMAYSAT
AEGAPELDLD PRSQSVQAAV HARFTISEPV LG