| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3719 |
|---|
| Symbol | |
|---|
| ID | 5060195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4262210 |
|---|
| End bp | 4263334 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475975 |
|---|
| Product | GTPase EngC |
|---|
| Protein accession | YP_001160528 |
|---|
| Protein GI | 145596231 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGCG ATGGTGACCG GCAAGAGCTG AGGGGAGCTG TCCTGGCAAC CAGACGGCGG
GAGTACGACG AGGACGACGT CCGGATTCGA CCCGGCCGGT CCTCACGCCC ACGTACCCGG
AGGCGTCCGC GCCACGCGGA CGCGGTCGAG GGGTTCGTCA CCGCCGTGGA CCGAGGGCGC
TACACCTGCG TACTGGCGGA CGCCGACCCG AAACAGGCAC CGGTCACCGC GATGCGAGCC
CGGGAGTTGG GCCGCAAGTC CGTTGTGGTG GGCGACCGGG TCGGACTGGT CGGCGACACG
TCCGGGACTC CCGGGGCACT GGCCCGGATC GTTCGCATAG CCGGCCGTAG CTCGGTGCTG
CGACGCACCG CCGAGGATGA CGCGACCACC GCCGAAGGGC GACTGGAACG GGTCGTCGTC
GCCAACGCCG ACCAGCTCGT GATCGTCAGC GCGCTGGCCG ATCCGCCGCC CCGGACCGGC
TTCATCGACC GCTGCCTGGT AGCCGCGTAC GACGCCGGCA TCGCGCCGCT GCTCTGCCTC
ACCAAGGCCG ACCTCGCCGG GCCGGAGGAG GTGCTCGGGT ACTACGCCGA GCTGGAGCTG
CCCCATGTCC TGATCTGCCC CGACTCGACC CTGGACGGGC TACGCGGCCT CCTTGCCGGA
CGGATCTCGG TGCTGGTGGG GCACTCCGGG GTAGGTAAGT CGACACTGGT CAACCGCCTG
GTCCCCGCGG CCACCCGGAC AGTTGGCCAG GTCAGCGCGA TCGGTCGAGG CCGGCACACG
TCAACCAGCG TGGTGGCGCT ACAGCTACCA CCGGTCGCCG ATTCCGCCGA GGGCTGGATC
ATCGACACCC CGGGAATCCG CAGCTTCGGG CTGGCCCACG TCTCCGCCGA AAGCCTCCTG
CACGGCTTCC CCGACCTCAC CGAGGGGGCG GCCGACTGCC CGGCGAACTG CCCACACACC
ATCGGTGAGC CGCTCTGCGG GCTGGGCGTC CGGGTCACCG CCGGCCAGGC CGACCCGCGC
CGGCTGGCCT CGTACCGGCG GCTCCTCGCC TCGCGCGCAG GCGAGAACGA GCCACGTACC
AAGCCCAGTT CCCGACACCC GGGTAACCCG TCGACGGGGA TCTGA
|
|---|
| Protein sequence | MVGDGDRQEL RGAVLATRRR EYDEDDVRIR PGRSSRPRTR RRPRHADAVE GFVTAVDRGR
YTCVLADADP KQAPVTAMRA RELGRKSVVV GDRVGLVGDT SGTPGALARI VRIAGRSSVL
RRTAEDDATT AEGRLERVVV ANADQLVIVS ALADPPPRTG FIDRCLVAAY DAGIAPLLCL
TKADLAGPEE VLGYYAELEL PHVLICPDST LDGLRGLLAG RISVLVGHSG VGKSTLVNRL
VPAATRTVGQ VSAIGRGRHT STSVVALQLP PVADSAEGWI IDTPGIRSFG LAHVSAESLL
HGFPDLTEGA ADCPANCPHT IGEPLCGLGV RVTAGQADPR RLASYRRLLA SRAGENEPRT
KPSSRHPGNP STGI
|
|---|
| |