| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3708 |
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| Symbol | |
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| ID | 5060184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4252245 |
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| End bp | 4254059 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640475964 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001160517 |
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| Protein GI | 145596220 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.949973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCCGG ACAAGCGAGA CCTGCCGGCG GCGGAGGAAC TGACCCTGGC CCGACTAGCC
CTTACCGAGG GTGACCTGGC GCACGCCGCC ACCCACATCG CGGGGGCGCT GGCGCAGGCG
CCGACCCTGC CCGAGGCCCA CGAGTTGCTC GCCCGGCTCG CTGCCGTCGA CGGCGACGGG
CTCGGCCTCT TTCCCCTGCA CCAGAACGTC TTCGTCGGGA CCGTGGTCGC CCGGGCCCAC
CTACTCGCCG CTGCCGGCCG TCCCGCCGAA GGGCTGGACC TGCTCGTCGC CGCCACCGGC
TACGCGCCCA CCGCACCATG GGCGGAGGTG CCCTGGGTGA CCGCCCCCGA CCTCGCCGAA
CGCCTCGGGC CGGAGCGCAC CGCCCAGATT CTCATGCAGG TCTGCGCCGC GACCGCGGAT
CCGGTCCCCC GGGCCGGCCA GGCCGCCCTC ACTCCATACC TCACGTTGGC CCGCAACGCG
GTGACGGCGC ACCACGGACA CGCGCTGCTG TTCGGGGCCG CCTCCGCACT GGCCCGTCGG
CTCGGCGAGG TAGCGCTTGC CGTCCGATGG GCGTCCCAGG GGCTACGCGC CGAGCCGTCG
AAGATCGGCG AGGTGTGGCT CGGGTACGCC CTCCGAAGCG CGGGGCGGAT CCGAGAAGCC
CTCGCGGCGC TGGAACGAGC CGTTGAGCAC GACCCGGACG ACCTGGCCGT CTATGCCGAC
ATCGCCGGCA CCCTCGCCGA CCACGGACGG CTGGACGAGG CCCTCGACTG GATCAACCGG
GCGCTCGCCC GGGACCCGAC GTTCGACTGT GCGGTGCACA CCGCACAGCG GCTGCGTTTC
CAGCGCGACG GCGATGTCGC CCACCTGATC GCGCTGGCGG ATTTCGTCCG GGAGCATCCC
GAGGACACCC ACGAGCACAC CGACCTCGCC GAGTCCTGCG CCGGCCAACC CTGGCTCGGA
CAGATCACTC CGGCCGCCGG CCCCGCTGTT GACGCGCTCC GGGCCAACCA TGCCGGCGGT
CAGCTGGGAG CCAGCGTCCG GCTCGGGTCG CCGGTACCAC CGAGTGCCCT GCACACTCTC
ACCCGAGCCG TGCCCGGCCT GCGAGTCCAG CTGGCGCACG GTCCGGGCCC TGACCCACGC
GAGCCCCGAC GAGCGGTTGA CTGGCACCTG TGGCGGCACG ACGGCACGCC CGCCGTCGAA
GCCCCCTCGC CACTGGCAGC CGAGCACCTC CGGCAGTTCG TGCATCCGGC GTGGCCCCAT
CCCCCGGCGG CGTACGACGC CGCCGTGGCC CTGGCCACCC TGGACCTGAC CGACCTACTC
GGTCTGCTGG CCCATCCGCC AGCGACCCCA CCGACCGCGC TGGGCCGGGT CCTCGACGAG
CAGGACCCGT CCCTCTGGGT CCGCAGCGTT CAGGTGTGGG CCTGCCTCGG GCTGCTGCAT
CACCGCACCG ACGAGCCGTG GCCGGCCTCC ACCCGCCGGG CGGTGCTTCT GGACCTCGCC
TGGGGTGTCG AGGACTGGGC CACCGAGGCC GCACTCTTCG CCCTGGTCAC CCTCGCCTGG
GTCGACCCGG CGGTCCGCCC CGAGGTCGCC GCGGTGGTCG CCGAGAGACT CGCCGACGCG
GTCGAGGTGG CGCGAACCCG TCCGGTCCCG ATCGCCAGGT CCCTGGCGCA CCTGGCACTG
GCGACCCCGG ACCTGACCCC GGAGTCCCGA GCGCTGGCCC AGACGTTGAC CGATGGCCGG
CCGCCGGTTC CCGCGCCGCC CGGCCGACTT CGCCACCTCT GGCGACACAT CACGGCCATC
TTCCGCCGCC CCTGA
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| Protein sequence | MSPDKRDLPA AEELTLARLA LTEGDLAHAA THIAGALAQA PTLPEAHELL ARLAAVDGDG
LGLFPLHQNV FVGTVVARAH LLAAAGRPAE GLDLLVAATG YAPTAPWAEV PWVTAPDLAE
RLGPERTAQI LMQVCAATAD PVPRAGQAAL TPYLTLARNA VTAHHGHALL FGAASALARR
LGEVALAVRW ASQGLRAEPS KIGEVWLGYA LRSAGRIREA LAALERAVEH DPDDLAVYAD
IAGTLADHGR LDEALDWINR ALARDPTFDC AVHTAQRLRF QRDGDVAHLI ALADFVREHP
EDTHEHTDLA ESCAGQPWLG QITPAAGPAV DALRANHAGG QLGASVRLGS PVPPSALHTL
TRAVPGLRVQ LAHGPGPDPR EPRRAVDWHL WRHDGTPAVE APSPLAAEHL RQFVHPAWPH
PPAAYDAAVA LATLDLTDLL GLLAHPPATP PTALGRVLDE QDPSLWVRSV QVWACLGLLH
HRTDEPWPAS TRRAVLLDLA WGVEDWATEA ALFALVTLAW VDPAVRPEVA AVVAERLADA
VEVARTRPVP IARSLAHLAL ATPDLTPESR ALAQTLTDGR PPVPAPPGRL RHLWRHITAI
FRRP
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