Gene Strop_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3683 
Symbol 
ID5060159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4222547 
End bp4223755 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content70% 
IMG OID640475939 
Productglycosyl transferase, group 1 
Protein accessionYP_001160492 
Protein GI145596195 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGGTT TAGTCGGGTG GCAACCGGGA ATCCGTCCCC GACTGGCAGC CGTGGTGGAG 
GCGGGGCAGC GGCGTGCCCA CCAGCGGCCG GAGGGGGGAC TCGTGGCGCG CAACCGCGGG
GACGGCAGCT CGGCCGGGCG GCCGCTACGG ATCGCGATGG TGGTCCCACC GTGGCTGTCG
GTGCCGCCAC CCGGCTACGG CGGCCTGGAA CACGTCGTCG CTGGCCTGGT GGACGGGCTG
ATCGCCCGGG GCCACCCGGT GACCCTCTTC GGGGCGGGTG AGCAGACCGG AACCGCCGCC
CGCTTCGTCT CGACCGACGC CGAGCTGAAG TTTCCCCGGA TGGGCGAGGC GTTGCCCGAG
CTGGCCCACC TCGTTCAGGT GAATCAGCTC GTCACCCCGG AACACTTCGA CGTGGTCCAC
GACCACACCA CGATCGGACC ACTGTTGGCC GGGCGGCGGT CAGTGCCCAC CGTCGCCACC
GTGCACGGCA ACCCGGTCGG GGAGTACGGC AACATCCTCG AAGAGATCGA TCAGGGTGTC
GGTCTGGTGG CCATCTCCCA TGCCCAACGG CGGGTCAACC TGCGGCTGCC GTGGATCGGC
ACCGTGCACA ACGCGCTGGA CGTCGAAGAC ATCCCGCACA AGCTGACCCC GGGCCGGGGG
CCGGTGCTCT GGCTGGCCCG GTTCAGCCCG GACAAGGGAC CCGATCTCGC GATCCGGGCC
TGCCGGGCGG CCGGCCTGCC GCTGATCCTC GCCGGCAAGT GCAACGAACC GGCCGAACGT
CGCTACTTCG ACGAGGTGGT CCGGCCAATG CTGGACGACG ATGTCACCGT CGTCCTCGAT
GCCGACCGGC GAGACTCGTT CCGCCTGCTC GTCGAAGCCC GCTGTCTGGT GATGCCGATC
CAGTGGGAGG AGCCGTTCGG TGTCGTCATG CTGGAGGCGA TGGCCACCGG GACGCCGGTG
GTGGCGCTAC GTCGGGGTGC CGTGCCGGAG TTGATCCGGC CCGGCCGCAC CGGCCTGATC
TGCGAGAGCG TGGACGAGTT GCCAGGGGCG CTGCGGGTGG CGGGCGGACT GGACCCGGCG
GTCTGTGTTG CGCACGTGGT GGAGAACTTT TCCACCACCC AGCTGGTTGA CGGCTACGAG
GCGGTGCTCC AGCGGTTCGT CTCGGCGGTG GTCCCCGCGC GAGAACCCGC CCCCATCACA
TTTCGCTGA
 
Protein sequence
MSGLVGWQPG IRPRLAAVVE AGQRRAHQRP EGGLVARNRG DGSSAGRPLR IAMVVPPWLS 
VPPPGYGGLE HVVAGLVDGL IARGHPVTLF GAGEQTGTAA RFVSTDAELK FPRMGEALPE
LAHLVQVNQL VTPEHFDVVH DHTTIGPLLA GRRSVPTVAT VHGNPVGEYG NILEEIDQGV
GLVAISHAQR RVNLRLPWIG TVHNALDVED IPHKLTPGRG PVLWLARFSP DKGPDLAIRA
CRAAGLPLIL AGKCNEPAER RYFDEVVRPM LDDDVTVVLD ADRRDSFRLL VEARCLVMPI
QWEEPFGVVM LEAMATGTPV VALRRGAVPE LIRPGRTGLI CESVDELPGA LRVAGGLDPA
VCVAHVVENF STTQLVDGYE AVLQRFVSAV VPAREPAPIT FR